RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 DPP7Q9UHL4 492 aa5.7□□□□□ -1.5
PMS1-203ENST00000409593 SH3BP1Q9Y3L3 701 aa5.7□□□□□ -1.5
PMS1-203ENST00000409593 CDY2AQ9Y6F7 541 aa5.7□□□□□ -1.5
PMS1-203ENST00000409593 PRAMEF4O60810 478 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 PRKD3O94806 890 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 FAM111BQ6SJ93 734 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 MAMDC4Q6UXC1 1216 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 Q6ZSN1 163 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 CMTM4Q8IZR5 234 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 AHCYL2Q96HN2 611 aaKnown RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 EPC1Q9H2F5 836 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 MYRFQ9Y2G1 1151 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 NRP1O14786 923 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 MTSS1O43312 755 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 CCT2P78371 535 aaKnown RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 CDK17Q00537 523 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 CRHR2Q13324 411 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 ELAVL1Q15717 326 aaKnown RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 RNF219Q5W0B1 726 aaPredicted RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 ZNF662Q6ZS27 426 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 SLC41A1Q8IVJ1 513 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 MSL3Q8N5Y2 521 aaKnown RBP5.69□□□□□ -1.5
PMS1-203ENST00000409593 MPHOSPH9Q99550 1183 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 TESMINQ9Y4I5 508 aa5.69□□□□□ -1.5
PMS1-203ENST00000409593 C1QTNF3-AMACRE9PGA6 284 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 FAPQ12884 760 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 NRN1LQ496H8 165 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 USP39Q53GS9 565 aaKnown RBP5.68□□□□□ -1.5
PMS1-203ENST00000409593 FKBP15Q5T1M5 1219 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 OR5M3Q8NGP4 307 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 RAX2Q96IS3 184 aa5.68□□□□□ -1.5
PMS1-203ENST00000409593 CADPSQ9ULU8 1353 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 A0A1W2PR48 441 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 MATN3O15232 486 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 CASRP41180 1078 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 DUSP2Q05923 314 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 TAS1R1Q7RTX1 841 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 DDX42Q86XP3 938 aaKnown RBP eCLIP5.67□□□□□ -1.5
PMS1-203ENST00000409593 MB21D1Q8N884 522 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 LMBR1Q8WVP7 490 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 GIT1Q9Y2X7 761 aa5.67□□□□□ -1.5
PMS1-203ENST00000409593 CYP27B1O15528 508 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 STC2O76061 302 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 LTA4HP09960 611 aaKnown RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 UBE3CQ15386 1083 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 TOR2AQ5JU69 321 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 ELOA2Q8IYF1 753 aaPredicted RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 AUTS2Q8WXX7 1259 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 ZNF512Q96ME7 567 aaPredicted RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 ATP8A1Q9Y2Q0 1164 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 WASHC2AQ641Q2 1341 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 TMEM127O75204 238 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 TNFRSF1AP19438 455 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 ACRV1P26436 265 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 CANXP27824 592 aaKnown RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 FAM214AQ32MH5 1076 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 SPTY2D1Q68D10 685 aaPredicted RBP5.66□□□□□ -1.5
PMS1-203ENST00000409593 MFSD5Q6N075 450 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 EXTL1Q92935 676 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 MIEF2Q96C03 454 aa5.66□□□□□ -1.5
PMS1-203ENST00000409593 IPO13O94829 963 aaKnown RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 MTHFD2P13995 350 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 GYPEP15421 78 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 GNAT2P19087 354 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 WNT3AP56704 352 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 MRPS9P82933 396 aaKnown RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 MEF2AQ02078 507 aaPredicted RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 ABHD15Q6UXT9 468 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 RNF207Q6ZRF8 634 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 C1orf210Q8IVY1 113 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 GSPT2Q8IYD1 628 aaKnown RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 CNTD1Q8N815 330 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 GLB1L3Q8NCI6 653 aaPredicted RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 PGBD4Q96DM1 585 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 CCM2LQ9NUG4 571 aaPredicted RBP5.65□□□□□ -1.51
PMS1-203ENST00000409593 DNAJC28Q9NX36 388 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 SLC5A4Q9NY91 659 aa5.65□□□□□ -1.51
PMS1-203ENST00000409593 MFAP3LO75121 409 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 CFBP00751 764 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 OSMP13725 252 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 Q6ZRM9 215 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
PMS1-203ENST00000409593 TSPEARQ8WU66 669 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 SNX33Q8WV41 574 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 ATXN2LQ8WWM7 1075 aaKnown RBP5.64□□□□□ -1.51
PMS1-203ENST00000409593 IL17RAQ96F46 866 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 ACE2Q9BYF1 805 aaPredicted RBP5.64□□□□□ -1.51
PMS1-203ENST00000409593 VPS11Q9H270 941 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 IFT122Q9HBG6 1241 aa5.64□□□□□ -1.51
PMS1-203ENST00000409593 HECAQ9UBI9 543 aaPredicted RBP5.64□□□□□ -1.51
PMS1-203ENST00000409593 AMHP03971 560 aa5.63□□□□□ -1.51
PMS1-203ENST00000409593 CTSSP25774 331 aa5.63□□□□□ -1.51
PMS1-203ENST00000409593 GPR3P46089 330 aa5.63□□□□□ -1.51
PMS1-203ENST00000409593 ERVK-21P61565 698 aa5.63□□□□□ -1.51
PMS1-203ENST00000409593 CNGB1Q14028 1251 aaPredicted RBP5.63□□□□□ -1.51
PMS1-203ENST00000409593 FAM50AQ14320 339 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms