RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 IFNL1Q8IU54 200 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 TNS4Q8IZW8 715 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 CSGALNACT2Q8N6G5 542 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 ANKS1AQ92625 1134 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 GATA6Q92908 595 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 NAP1L3Q99457 506 aaPredicted RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.46□□□□□ -0.581e-7■□□□□ 9.6
NIF3L1-204ENST00000409357 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 PIDD1Q9HB75 910 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 ABCF2Q9UG63 623 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 PNMA2Q9UL42 364 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 KCNJ14Q9UNX9 436 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 TBC1D30Q9Y2I9 924 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 FAM187AA6NFU0 413 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 USP2O75604 605 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 IDO1P14902 403 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 CDC25CP30307 473 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 VHLP40337 213 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 RASSF2P50749 326 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 RAD23BP54727 409 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 DHX9Q08211 1270 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 TNFAIP1Q13829 316 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 VWA3BQ502W6 1294 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 HGSNATQ68CP4 663 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 CDC42EP5Q6NZY7 148 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 UNC13DQ70J99 1090 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 TRIM42Q8IWZ5 723 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 MDM1Q8TC05 714 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 PRCCQ92733 491 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 MRIQ9BWK5 157 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 UBE2OQ9C0C9 1292 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 ARHGEF10LQ9HCE6 1279 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 KBTBD4Q9NVX7 518 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 DDX43Q9NXZ2 648 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 GDAQ9Y2T3 454 aa11.45□□□□□ -0.58
NIF3L1-204ENST00000409357 DOCK2Q92608 1830 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 TRPA1O75762 1119 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 GJA5P36382 358 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 TUBP50607 506 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 PMS1P54277 932 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 TRADDQ15628 312 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 SLC9C1Q4G0N8 1177 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 TTC38Q5R3I4 469 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 ZFPM1Q8IX07 1006 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 MAML3Q96JK9 1138 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 CCSER1Q9C0I3 900 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 NEUROG2Q9H2A3 272 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 DPH5Q9H2P9 285 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 EPB41L4BQ9H329 900 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 RNF186Q9NXI6 227 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
NIF3L1-204ENST00000409357 MYH1P12882 1939 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 MYH6P13533 1939 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 GAKO14976 1311 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 RGS16O15492 202 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 TMCC1O94876 653 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PLEKP08567 350 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ADD2P35612 726 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 NPEPPSP55786 919 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 POLE2P56282 527 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 MECOMQ03112 1051 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SULT2A1Q06520 285 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 TCP10Q12799 353 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SUPT20HL1Q3ZLR7 823 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SLFN11Q7Z7L1 901 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ALDH16A1Q8IZ83 802 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 UTP4Q969X6 686 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 FMO2Q99518 471 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 BLZF1Q9H2G9 400 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 EPB41L1Q9H4G0 881 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 NDUFA13Q9P0J0 144 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 DLGAP2Q9P1A6 1054 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 FAM198AQ9UFP1 575 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 ATAD5Q96QE3 1844 aa11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 A0A0A6YYK5 440 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-204ENST00000409357 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms