RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 WDR64B1ANS9 1081 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 GNGT2O14610 69 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 CAND2O75155 1236 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 PPM1NQ8N819 430 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 CNBD1Q8NA66 436 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 LRCH1Q9Y2L9 728 aa18.79■□□□□ 0.6
SMPD4-202ENST00000409031 ZBED1O96006 694 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 PLEKP08567 350 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-202ENST00000409031 TMEM191BP0C7N4 346 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 ELF3P78545 371 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-202ENST00000409031 FAF2Q96CS3 445 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 KCNK16Q96T55 309 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 KLC2Q9H0B6 622 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
SMPD4-202ENST00000409031 DSG1Q02413 1049 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 OPTNQ96CV9 577 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 C9orf72Q96LT7 481 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 FAM210AQ96ND0 272 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 HESX1Q9UBX0 185 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 KPNA7A9QM74 516 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 TMCC1O94876 653 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 PDIA5Q14554 519 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 ACTRT1Q8TDG2 376 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 LEMD3Q9Y2U8 911 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 ABCB11O95342 1321 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 PDXKO00764 312 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 USP17L8P0C7I0 530 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 TMEM253P0C7T8 217 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 CYTH1Q15438 398 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 AGPAT1Q99943 283 aa18.78■□□□□ 0.6
SMPD4-202ENST00000409031 PSMC3IPQ9P2W1 217 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-202ENST00000409031 UNC13BO14795 1591 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 ZBBXA8MT70 800 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 UBE2SQ16763 222 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 STK33Q9BYT3 514 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 GOLGA8MH3BSY2 632 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 MAPK7Q13164 816 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 DNAJC3Q13217 504 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 THOC5Q13769 683 aaKnown RBP18.77■□□□□ 0.6
SMPD4-202ENST00000409031 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 ING2Q9H160 280 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 CCDC134Q9H6E4 229 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 SATB2Q9UPW6 733 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 ESRRBO95718 433 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 RARGP13631 454 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 C4orf33Q8N1A6 199 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 RNF25Q96BH1 459 aaPredicted RBP18.77■□□□□ 0.6
SMPD4-202ENST00000409031 MAGEB18Q96M61 343 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 SEPT10Q9P0V9 454 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 HAO1Q9UJM8 370 aa18.77■□□□□ 0.6
SMPD4-202ENST00000409031 HDAC4P56524 1084 aa18.77■□□□□ 0.59
SMPD4-202ENST00000409031 WASHC2DQ5SRD0 308 aa18.77■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF577Q9BSK1 485 aa18.77■□□□□ 0.59
SMPD4-202ENST00000409031 OSBPL8Q9BZF1 889 aa18.77■□□□□ 0.59
SMPD4-202ENST00000409031 A1CFQ9NQ94 594 aaKnown RBP18.77■□□□□ 0.59
SMPD4-202ENST00000409031 HEG1Q9ULI3 1381 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 AHCYL1O43865 530 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 RTN2O75298 545 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 TFDP2Q14188 446 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 HIF1AQ16665 826 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 HP1BP3Q5SSJ5 553 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF746Q6NUN9 644 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-202ENST00000409031 RNF169Q8NCN4 708 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 UVRAGQ9P2Y5 699 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 ERFP50548 548 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 USP6NLQ92738 828 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 ANO3Q9BYT9 981 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 SPC25Q9HBM1 224 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 NUB1Q9Y5A7 615 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 PREX2Q70Z35 1606 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 ABCD1P33897 745 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 SLC1A1P43005 524 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 GRM4Q14833 912 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 EIF1ADQ8N9N8 165 aaKnown RBP18.76■□□□□ 0.59
SMPD4-202ENST00000409031 SUPT20HQ8NEM7 779 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 HPS3Q969F9 1004 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 PNPLA7Q6ZV29 1317 aa18.76■□□□□ 0.59
SMPD4-202ENST00000409031 MYBL1P10243 752 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 CACNA2D1P54289 1103 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 EDRF1Q3B7T1 1238 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 NT5DC1Q5TFE4 455 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ATG9AQ7Z3C6 839 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 HDAC7Q8WUI4 952 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 SNRNP27Q8WVK2 155 aaKnown RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 SEL1LQ9UBV2 794 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ICA1Q05084 483 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 RBBP8NLQ8NC74 664 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 AGXT2Q9BYV1 514 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 KMT5AQ9NQR1 393 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms