RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 DDHD2O94830 711 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 ALADP13716 330 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 GLRA2P23416 452 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 TECP42680 631 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 MXD4Q14582 209 aaPredicted RBP25.03■■□□□ 1.6
KDELR3-202ENST00000409006 MRPL43Q8N983 215 aaKnown RBP25.03■■□□□ 1.6
KDELR3-202ENST00000409006 AUTS2Q8WXX7 1259 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 PGBD4Q96DM1 585 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 TMEM169Q96HH4 297 aa25.03■■□□□ 1.6
KDELR3-202ENST00000409006 EIF2AQ9BY44 585 aaKnown RBP25.03■■□□□ 1.6
KDELR3-202ENST00000409006 FOXP1Q9H334 677 aaPredicted RBP25.03■■□□□ 1.6
KDELR3-202ENST00000409006 SLC11A1P49279 550 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 RNASELQ05823 741 aaKnown RBP25.02■■□□□ 1.6
KDELR3-202ENST00000409006 MBTD1Q05BQ5 628 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 SMC1AQ14683 1233 aaKnown RBP25.02■■□□□ 1.6
KDELR3-202ENST00000409006 AMHR2Q16671 573 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 ANKRD54Q6NXT1 300 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 SYCE2Q6PIF2 218 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 MAEAQ7L5Y9 396 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 IFNLR1Q8IU57 520 aaPredicted RBP25.02■■□□□ 1.6
KDELR3-202ENST00000409006 RNF135Q8IUD6 432 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 SUSD6Q92537 303 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 IGSF21Q96ID5 467 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 POP1Q99575 1024 aaKnown RBP25.02■■□□□ 1.6
KDELR3-202ENST00000409006 APOL5Q9BWW9 433 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 VN1R3Q9BXE9 311 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 ZBP1Q9H171 429 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 S1PR5Q9H228 398 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 RNF39Q9H2S5 420 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 RSAD1Q9HA92 442 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 GPRC5CQ9NQ84 441 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 MUTYHQ9UIF7 546 aa25.02■■□□□ 1.6
KDELR3-202ENST00000409006 INO80B-WBP1J3KQ70 363 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 USO1O60763 962 aaKnown RBP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 ERLIN2O94905 339 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 XRCC6P12956 609 aaKnown RBP eCLIP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 HMGN5P82970 282 aaKnown RBP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 NBR1Q14596 966 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 VPS52Q8N1B4 723 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 RSPH1Q8WYR4 309 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 CCDC43Q96MW1 224 aaKnown RBP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 POLR3FQ9H1D9 316 aaPredicted RBP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 SH2B1Q9NRF2 756 aaPredicted RBP25.01■■□□□ 1.59
KDELR3-202ENST00000409006 IPPQ9Y573 584 aa25.01■■□□□ 1.59
KDELR3-202ENST00000409006 FSD2A1L4K1 749 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 CLASP2O75122 1294 aaKnown RBP25■■□□□ 1.59
KDELR3-202ENST00000409006 CXCL14O95715 111 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 OR52Z1P0C646 297 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 NCLP19338 710 aaKnown RBP25■■□□□ 1.59
KDELR3-202ENST00000409006 POU5F1BQ06416 359 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 TFDP1Q14186 410 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 TTC38Q5R3I4 469 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 DDX53Q86TM3 631 aaKnown RBP25■■□□□ 1.59
KDELR3-202ENST00000409006 TUFT1Q9NNX1 390 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 CDH22Q9UJ99 828 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 HES2Q9Y543 173 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 HCFC2Q9Y5Z7 792 aa25■■□□□ 1.59
KDELR3-202ENST00000409006 LOC730098B7Z3J9 87 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 POMCP01189 267 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 ARF4P18085 180 aaPredicted RBP24.99■■□□□ 1.59
KDELR3-202ENST00000409006 CA8P35219 290 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 RBM25P49756 843 aaKnown RBP24.99■■□□□ 1.59
KDELR3-202ENST00000409006 POTEGQ6S5H5 508 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 CDR2LQ86X02 465 aaPredicted RBP24.99■■□□□ 1.59
KDELR3-202ENST00000409006 NOSTRINQ8IVI9 506 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 C4orf32Q8N8J7 132 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 FAM184AQ8NB25 1140 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 URGCPQ8TCY9 931 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 POLR3CQ9BUI4 534 aaPredicted RBP24.99■■□□□ 1.59
KDELR3-202ENST00000409006 CNTNAP2Q9UHC6 1331 aa24.99■■□□□ 1.59
KDELR3-202ENST00000409006 B4GALT5O43286 388 aa24.98■■□□□ 1.59
KDELR3-202ENST00000409006 AXLP30530 894 aa24.98■■□□□ 1.59
KDELR3-202ENST00000409006 PCBP1Q15365 356 aaKnown RBP eCLIP24.98■■□□□ 1.59
KDELR3-202ENST00000409006 NOTUMQ6P988 496 aa24.98■■□□□ 1.59
KDELR3-202ENST00000409006 PHF7Q9BWX1 381 aaPredicted RBP24.98■■□□□ 1.59
KDELR3-202ENST00000409006 CSRNP2Q9H175 543 aa24.98■■□□□ 1.59
KDELR3-202ENST00000409006 MIOSQ9NXC5 875 aa24.98■■□□□ 1.59
KDELR3-202ENST00000409006 DBR1Q9UK59 544 aaKnown RBP24.98■■□□□ 1.59
KDELR3-202ENST00000409006 TECTAO75443 2155 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 PRR33A8MZF0 331 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 SRGAP2BP0DMP2 458 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 CTSAP10619 480 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 ITGA4P13612 1032 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 TOB1P50616 345 aaPredicted RBP24.97■■□□□ 1.59
KDELR3-202ENST00000409006 ORC2Q13416 577 aaPredicted RBP24.97■■□□□ 1.59
KDELR3-202ENST00000409006 ECM1Q16610 540 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 RPGRIP1Q96KN7 1286 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 NACC1Q96RE7 527 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 GAD1Q99259 594 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 NFKBIZQ9BYH8 718 aa24.97■■□□□ 1.59
KDELR3-202ENST00000409006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.96■■□□□ 1.59
KDELR3-202ENST00000409006 RPA1P27694 616 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 CBX2Q14781 532 aaPredicted RBP24.96■■□□□ 1.59
KDELR3-202ENST00000409006 HERC4Q5GLZ8 1057 aaPredicted RBP24.96■■□□□ 1.59
KDELR3-202ENST00000409006 CNNM3Q8NE01 707 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 BSNDQ8WZ55 320 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 CASP10Q92851 521 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 APOL6Q9BWW8 343 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 KANSL3Q9P2N6 904 aa24.96■■□□□ 1.59
KDELR3-202ENST00000409006 MYO10Q9HD67 2058 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms