RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GOLGA5Q8TBA6 731 aa22.45■■□□□ 1.18
CHKB-201ENST00000406938 SRRTQ9BXP5 876 aaKnown RBP22.45■■□□□ 1.18
CHKB-201ENST00000406938 SENP6Q9GZR1 1112 aaPredicted RBP22.45■■□□□ 1.18
CHKB-201ENST00000406938 USP20Q9Y2K6 914 aa22.45■■□□□ 1.18
CHKB-201ENST00000406938 CLIC2O15247 247 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 CSDE1O75534 798 aaKnown RBP22.44■■□□□ 1.18
CHKB-201ENST00000406938 NR3C1P04150 777 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 IQCF3P0C7M6 154 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 NR2F2P24468 414 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 PTK7Q13308 1070 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 SLC39A4Q6P5W5 647 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 ZC3H3Q8IXZ2 948 aaKnown RBP22.44■■□□□ 1.18
CHKB-201ENST00000406938 DIS3LQ8TF46 1054 aaKnown RBP22.44■■□□□ 1.18
CHKB-201ENST00000406938 NOC3LQ8WTT2 800 aaKnown RBP22.44■■□□□ 1.18
CHKB-201ENST00000406938 OSMRQ99650 979 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 TRPV6Q9H1D0 765 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 THAP9Q9H5L6 903 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 CDHR5Q9HBB8 845 aa22.44■■□□□ 1.18
CHKB-201ENST00000406938 ANKRD63C9JTQ0 380 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 PIGRP01833 764 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 ATP1A3P13637 1013 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 LIG4P49917 911 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 CDK7P50613 346 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 MRPS6P82932 125 aaKnown RBP22.43■■□□□ 1.18
CHKB-201ENST00000406938 RPAINQ86UA6 219 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 DHX38Q92620 1227 aaKnown RBP22.43■■□□□ 1.18
CHKB-201ENST00000406938 GCOM2Q9BZD3 368 aaPredicted RBP22.43■■□□□ 1.18
CHKB-201ENST00000406938 FZD8Q9H461 694 aa22.43■■□□□ 1.18
CHKB-201ENST00000406938 TTLL13PA6NNM8 815 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 RPLP2P05387 115 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 SNRPFP62306 86 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 NFIL3Q16649 462 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 SRGAP1Q7Z6B7 1085 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 IRF2BP1Q8IU81 584 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 ZNF710Q8N1W2 664 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 ANKLE1Q8NAG6 615 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 CBWD1Q9BRT8 395 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 TMEM106CQ9BVX2 250 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 TARS2Q9BW92 718 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 MRPL4Q9BYD3 311 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 PRMT7Q9NVM4 692 aaPredicted RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 CGNQ9P2M7 1197 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 M0QZ92 97 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 ACKR2O00590 384 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 B4GALT5O43286 388 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 CTSHP09668 335 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 DARSP14868 501 aaKnown RBP22.42■■□□□ 1.18
CHKB-201ENST00000406938 ADAM9Q13443 819 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 ARMCX5Q6P1M9 558 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 TMEM40Q8WWA1 233 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 CEP63Q96MT8 703 aa22.42■■□□□ 1.18
CHKB-201ENST00000406938 CETN3O15182 167 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 FGFR1OPO95684 399 aaKnown RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 COL6A1P12109 1028 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 RPL13P26373 211 aaKnown RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 ADSSP30520 456 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 THPOP40225 353 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 CYP2J2P51589 502 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 CRYBB1P53674 252 aaPredicted RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 PRPF4BQ13523 1007 aaKnown RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 SNX17Q15036 470 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 AMHR2Q16671 573 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 FAM187BQ17R55 369 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 TRIM71Q2Q1W2 868 aaKnown RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 C12orf56Q8IXR9 622 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 FAM126BQ8IXS8 530 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 CELF4Q9BZC1 486 aaKnown RBP22.41■■□□□ 1.18
CHKB-201ENST00000406938 TRPV2Q9Y5S1 764 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 CDY2AQ9Y6F7 541 aa22.41■■□□□ 1.18
CHKB-201ENST00000406938 CNTNAP2Q9UHC6 1331 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 KCNJ18B7U540 433 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 EIF4BP23588 611 aaKnown RBP22.4■■□□□ 1.18
CHKB-201ENST00000406938 ATN1P54259 1190 aaPredicted RBP22.4■■□□□ 1.18
CHKB-201ENST00000406938 PLCB2Q00722 1185 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 KCNJ12Q14500 433 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 ZPBP2Q6X784 338 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 SLC9A9Q8IVB4 645 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 CNOT6LQ96LI5 555 aaKnown RBP22.4■■□□□ 1.18
CHKB-201ENST00000406938 PRIMPOLQ96LW4 560 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 PCIF1Q9H4Z3 704 aa22.4■■□□□ 1.18
CHKB-201ENST00000406938 AP5Z1O43299 807 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 ERLIN2O94905 339 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 CDK11BP21127 795 aaKnown RBP22.39■■□□□ 1.18
CHKB-201ENST00000406938 FGFR4P22455 802 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 MGAT3Q09327 533 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 SLC39A5Q6ZMH5 540 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 FAM114A1Q8IWE2 563 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 TMEM174Q8WUU8 243 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 ACO2Q99798 780 aaKnown RBP22.39■■□□□ 1.18
CHKB-201ENST00000406938 DMAC2Q9NW81 257 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 HSPBP1Q9NZL4 362 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 ANKFY1Q9P2R3 1169 aa22.39■■□□□ 1.18
CHKB-201ENST00000406938 MAGEC2Q9UBF1 373 aaPredicted RBP22.39■■□□□ 1.18
CHKB-201ENST00000406938 TSPAN1O60635 241 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 CHRNA1P02708 482 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 MYBPC2Q14324 1141 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 TCP11X2Q5H9J9 407 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 CEP135Q66GS9 1140 aa22.39■■□□□ 1.17
CHKB-201ENST00000406938 CREBRFQ8IUR6 639 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms