RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ARPC5LQ9BPX5 153 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 B3GNT5Q9BYG0 378 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 OSBPL6Q9BZF3 934 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 NUP62CLQ9H1M0 184 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 SAE1Q9UBE0 346 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 SCOCQ9UIL1 159 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZFP69BQ9UJL9 534 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 LIMCH1Q9UPQ0 1083 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 PQBP1O60828 265 aaKnown RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 FOSP01100 380 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 C8BP07358 591 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 GSPT1P15170 499 aaKnown RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 RPL17P18621 184 aaKnown RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 VIPR1P32241 457 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 AGFG1P52594 562 aaKnown RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 SESN2P58004 480 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 BTKQ06187 659 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 MGAT5Q09328 741 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 DHX8Q14562 1220 aaKnown RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 LLGL1Q15334 1064 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 KCNMB1Q16558 191 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 GRAMD1BQ3KR37 738 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 HSP90AB4PQ58FF6 505 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 OTOP2Q7RTS6 562 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZSWIM9Q86XI8 627 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 DRC7Q8IY82 874 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 TTLL6Q8N841 843 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 GPR156Q8NFN8 814 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 PPP1R35Q8TAP8 253 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 CGRRF1Q99675 332 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZNF552Q9H707 407 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 SIRT5Q9NXA8 310 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 TAGLN3Q9UI15 199 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 L1RE1Q9UN81 338 aa5.9□□□□□ -1.46
HMGB3P18-201ENST00000406327 NACADO15069 1562 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 A6NNZ2 444 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 FOXN3O00409 490 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 FTLP02792 175 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 C8AP07357 584 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 EDNRBP24530 442 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 ECHS1P30084 290 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 GLRBP48167 497 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 CD83Q01151 205 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 SEMA5AQ13591 1074 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 POLD3Q15054 466 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 C3orf36Q3SXR2 165 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 C4orf46Q504U0 113 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 C10orf62Q5T681 223 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 RNF220Q5VTB9 566 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 B3GNT8Q7Z7M8 397 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 IFNL2Q8IZJ0 200 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 UNC5BQ8IZJ1 945 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 KRT78Q8N1N4 520 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 PPP1R14CQ8TAE6 165 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 LRTOMTQ8WZ04 291 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 WDR92Q96MX6 357 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 PTPN18Q99952 460 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 TACO1Q9BSH4 297 aaKnown RBP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 KCND1Q9NSA2 647 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 RBPJLQ9UBG7 517 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 RPTORQ8N122 1335 aa5.89□□□□□ -1.47
HMGB3P18-201ENST00000406327 A0A0G2JNJ9 132 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 H0Y858 1186 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 PEX10O60683 326 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 ALDH2P05091 517 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 LTA4HP09960 611 aaKnown RBP5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 MYBP10242 640 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 FBLN1P23142 703 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 PEX2P28328 305 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 KRT72Q14CN4 511 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 NOMO1Q15155 1222 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 CNN3Q15417 329 aaKnown RBP5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 LONRF1Q17RB8 773 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 TMEM200BQ69YZ2 307 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 MAEAQ7L5Y9 396 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 SRLQ86TD4 932 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 FAM129CQ86XR2 697 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 FAM26EQ8N5C1 309 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 POU5F2Q8N7G0 328 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 KLHDC4Q8TBB5 520 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 RIN2Q8WYP3 895 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 PGBD4Q96DM1 585 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 CYFIP2Q96F07 1278 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 BTBD1Q9H0C5 482 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 PLCB1Q9NQ66 1216 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 TDP1Q9NUW8 608 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 Q9UFV3 132 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 VWA7Q9Y334 891 aa5.88□□□□□ -1.47
HMGB3P18-201ENST00000406327 DAPK3O43293 454 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms