RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 SPIRE1Q08AE8 756 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 DHX34Q14147 1143 aaKnown RBP16.73■□□□□ 0.27
ATG4B-205ENST00000404914 NFIXQ14938 502 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 ARHGAP44Q17R89 818 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 MTMR4Q9NYA4 1195 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 TP73O15350 636 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 SMNDC1O75940 238 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■□□□□ 9.1
ATG4B-205ENST00000404914 ACSL3O95573 720 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 NOVP48745 357 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 PDE6CP51160 858 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 ZC2HC1CQ53FD0 456 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-205ENST00000404914 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 ZNF483Q8TF39 744 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-205ENST00000404914 DYDC1Q8WWB3 177 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 ANKRD2Q9GZV1 360 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 PNMA6FA0A0J9YX94 578 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 PDXKO00764 312 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 GCNT3O95395 438 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 TAL1P17542 331 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 TM4SF1P30408 202 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 CCDC137Q6PK04 289 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 MICAL1Q8TDZ2 1067 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 UTP4Q969X6 686 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 NKX1-2Q9UD57 310 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ZMYM2Q9UBW7 1377 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 UTRNP46939 3433 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ATMINO43313 823 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 MSH2P43246 934 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 DRG2P55039 364 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 RHBDL3P58872 404 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-205ENST00000404914 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
ATG4B-205ENST00000404914 ENO4A6NNW6 628 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 MIS18BP1Q6P0N0 1132 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ASRGL1Q7L266 308 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 BTBD6Q96KE9 485 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 PWWP2AQ96N64 755 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 TYW1Q9NV66 732 aaKnown RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ATP8B3O60423 1300 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 SNHG28P0DPA3 235 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 PYGMP11217 842 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 NMT1P30419 496 aaKnown RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 CHKAP35790 457 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ANKRD20A2Q5SQ80 823 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ANKRD20A1Q5TYW2 823 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 ANKRD20A3Q5VUR7 823 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 CCHCR1Q8TD31 782 aa16.71■□□□□ 0.27
ATG4B-205ENST00000404914 CDC42EP4Q9H3Q1 356 aaKnown RBP16.71■□□□□ 0.27
ATG4B-205ENST00000404914 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 CALUO43852 315 aaPredicted RBP16.71■□□□□ 0.26
ATG4B-205ENST00000404914 ALAS1P13196 640 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 GYS1P13807 737 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 LMNB1P20700 586 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 ANXA13P27216 316 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 ZNF543Q08ER8 600 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 SLC15A2Q16348 729 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 CYP4X1Q8N118 509 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.26
ATG4B-205ENST00000404914 TMEM109Q9BVC6 243 aa16.71■□□□□ 0.26
ATG4B-205ENST00000404914 ZMYND8Q9ULU4 1186 aaPredicted RBP16.71■□□□□ 0.26
ATG4B-205ENST00000404914 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CTNNA2P26232 953 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 BHMT2Q9H2M3 363 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 KCNK9Q9NPC2 374 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 PCYOX1Q9UHG3 505 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 RASAL2Q9UJF2 1139 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 FOXN3O00409 490 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-205ENST00000404914 ZBTB39O15060 712 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 MYBL1P10243 752 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CETPP11597 493 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 RARGP13631 454 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 CCND1P24385 295 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 FMO5P49326 533 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 PICALMQ13492 652 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 ASPRV1Q53RT3 343 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 PRR16Q569H4 304 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
ATG4B-205ENST00000404914 SYT2Q8N9I0 419 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms