RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 RNF169Q8NCN4 708 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
CDPF1-203ENST00000404583 STAMQ92783 540 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 DHX58Q96C10 678 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 TRAIPQ9BWF2 469 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 ELAC1Q9H777 363 aaKnown RBP16.09■□□□□ 0.17
CDPF1-203ENST00000404583 CERS4Q9HA82 394 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 RC3H2Q9HBD1 1191 aaKnown RBP16.09■□□□□ 0.17
CDPF1-203ENST00000404583 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
CDPF1-203ENST00000404583 TMEM161AQ9NX61 479 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 ODF2LQ9ULJ1 636 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 USP20Q9Y2K6 914 aa16.09■□□□□ 0.17
CDPF1-203ENST00000404583 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
CDPF1-203ENST00000404583 COL4A6Q14031 1691 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 VCANP13611 3396 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 LINC01553A4QN01 128 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 K7ERI5 159 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 SLC16A4O15374 487 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 FAM13AO94988 1023 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 EDN1P05305 212 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 PRKCBP05771 671 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 FGFR1P11362 822 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 ATF7P17544 494 aaPredicted RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 EFNA5P52803 228 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 FAM187BQ17R55 369 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 PAN2Q504Q3 1202 aaKnown RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 UBXN11Q5T124 520 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 NOTUMQ6P988 496 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 ZNF598Q86UK7 904 aaKnown RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 MYLIPQ8WY64 445 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 DDX12PQ92771 950 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 PRIMPOLQ96LW4 560 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 CDX2Q99626 313 aaPredicted RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 NTPCRQ9BSD7 190 aaKnown RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 CHD7Q9P2D1 2997 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
CDPF1-203ENST00000404583 ARHGAP28Q9P2N2 729 aa16.08■□□□□ 0.16
CDPF1-203ENST00000404583 NLRC5Q86WI3 1866 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 ACKR2O00590 384 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 EOMESO95936 686 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 CMA1P23946 247 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
CDPF1-203ENST00000404583 GRIN2CQ14957 1233 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 TAS1R3Q7RTX0 852 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 SPIRE2Q8WWL2 714 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 LPPQ93052 612 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
CDPF1-203ENST00000404583 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 PARVGQ9HBI0 331 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 RNF19AQ9NV58 838 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
CDPF1-203ENST00000404583 A0A1B0GUA9 196 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 TBKBP1A7MCY6 615 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 MEIS3P2A8K0S8 358 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 ZNF623O75123 536 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 SKIP12755 728 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 ZNF131P52739 623 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 SMTNP53814 917 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
CDPF1-203ENST00000404583 TMEM132AQ24JP5 1023 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 TMEM161BQ8NDZ6 487 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 KCNG1Q9UIX4 513 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 MTUS1Q9ULD2 1270 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 CNTNAP2Q9UHC6 1331 aa16.06■□□□□ 0.16
CDPF1-203ENST00000404583 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
CDPF1-203ENST00000404583 PFKFB1P16118 471 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 RAB27AP51159 221 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 CLLU1OSQ5K130 101 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
CDPF1-203ENST00000404583 CMTR2Q8IYT2 770 aaKnown RBP16.05■□□□□ 0.16
CDPF1-203ENST00000404583 SMG8Q8ND04 991 aaKnown RBP16.05■□□□□ 0.16
CDPF1-203ENST00000404583 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
CDPF1-203ENST00000404583 C17orf80Q9BSJ5 609 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 PRDM12Q9H4Q4 367 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 KIAA1671Q9BY89 1806 aa16.05■□□□□ 0.16
CDPF1-203ENST00000404583 EPOPA6NHQ4 379 aa16.04■□□□□ 0.16
CDPF1-203ENST00000404583 RFXAPO00287 272 aa16.04■□□□□ 0.16
CDPF1-203ENST00000404583 TRAK2O60296 914 aa16.04■□□□□ 0.16
CDPF1-203ENST00000404583 NPTXRO95502 500 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms