RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 GCLMP48507 274 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 QRICH1Q2TAL8 776 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 RFX8Q6ZV50 586 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 SPDYE1Q8NFV5 336 aaPredicted RBP10.29□□□□□ -0.76
SMC1B-202ENST00000404354 TXLNGYQ9BZA5 131 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 SLCO1B3Q9NPD5 702 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 ADAM22Q9P0K1 906 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 WDR91A4D1P6 747 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 GNPATO15228 680 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 EXOC3O60645 756 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 VCAM1P19320 739 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 PTGIRP43119 386 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 SSR1P43307 286 aaKnown RBP10.29□□□□□ -0.76
SMC1B-202ENST00000404354 GTF2IP78347 998 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 SATB1Q01826 763 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 ADCY2Q08462 1091 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 EDRF1Q3B7T1 1238 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 SPATA21Q7Z572 469 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 C3orf20Q8ND61 904 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 PGM2Q96G03 612 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 EBF2Q9HAK2 575 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 AFF2P51816 1311 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 AP1G2O75843 785 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 AGTP01019 485 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 LDHCP07864 332 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 FAM86B2P0C5J1 330 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 SPATA31C1P0DKV0 1188 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 PRKCIP41743 596 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ABL2P42684 1182 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 FMO5P49326 533 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 PPATQ06203 517 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 MGAT5Q09328 741 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 RPUSD2Q8IZ73 545 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 GOLGA8IPA6NC78 632 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 GOLGA8JA6NMD2 632 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 SRRM3A6NNA2 597 aaPredicted RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 LMNB1P20700 586 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 JAM2P57087 298 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ATP11AP98196 1134 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ZNF543Q08ER8 600 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ITIH4Q14624 930 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 SEL1L2Q5TEA6 688 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 LONP2Q86WA8 852 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ERP27Q96DN0 273 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 INTS2Q9H0H0 1204 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CARD9Q9H257 536 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CCDC88AQ3V6T2 1871 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 KDM3AQ9Y4C1 1321 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 SNED1Q8TER0 1413 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CES2O00748 559 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 THAP12O43422 761 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 PHF2O75151 1096 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 NUDT17P0C025 328 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CETPP11597 493 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CHRNB2P17787 502 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 MARSP56192 900 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 ARHGAP4P98171 946 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 SEC14L1Q92503 715 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 CHST7Q9NS84 486 aa10.28□□□□□ -0.76
SMC1B-202ENST00000404354 TYW1Q9NV66 732 aaKnown RBP10.28□□□□□ -0.76
SMC1B-202ENST00000404354 A0A1W2PRG0 241 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 POC1B-GALNT4F8VUJ3 575 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 PPP1R12AO14974 1030 aaPredicted RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 MAP3K13O43283 966 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 CBX6O95503 412 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 GSTO1P78417 241 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 SARNPP82979 210 aaKnown RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 ZNF268Q14587 947 aaPredicted RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 TMED2Q15363 201 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 VSTM1Q6UX27 236 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 TPTE2Q6XPS3 522 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 UBL4BQ8N7F7 174 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 OSBPL1AQ9BXW6 950 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 PPP1R12CQ9BZL4 782 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 ALG13Q9NP73 1137 aaKnown RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 DDX4Q9NQI0 724 aaKnown RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 METTL5Q9NRN9 209 aaKnown RBP10.27□□□□□ -0.76
SMC1B-202ENST00000404354 KLHL14Q9P2G3 628 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 KCNG1Q9UIX4 513 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 INTUQ9ULD6 942 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 TRAF3IP3Q9Y228 551 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 RABGAP1Q9Y3P9 1069 aa10.27□□□□□ -0.76
SMC1B-202ENST00000404354 UTRNP46939 3433 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms