RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 GJA3Q9Y6H8 435 aa14.09□□□□□ -0.15
PRAME-203ENST00000402697 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 WDR64B1ANS9 1081 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 ZBTB39O15060 712 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 ERVK-9P63128 1117 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 HLTFQ14527 1009 aaKnown RBP eCLIP14.08□□□□□ -0.153e-8■■■■□ 23.8
PRAME-203ENST00000402697 TBC1D10BQ4KMP7 808 aaPredicted RBP14.08□□□□□ -0.15
PRAME-203ENST00000402697 TTMPQ5BVD1 217 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 PHLDB3Q6NSJ2 640 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 HAUS6Q7Z4H7 955 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 UBL4BQ8N7F7 174 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 SYTL5Q8TDW5 730 aaPredicted RBP14.08□□□□□ -0.15
PRAME-203ENST00000402697 HOOK2Q96ED9 719 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 ATP6V1G3Q96LB4 118 aa14.08□□□□□ -0.15
PRAME-203ENST00000402697 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 ATXN2Q99700 1313 aaKnown RBP14.08□□□□□ -0.16
PRAME-203ENST00000402697 H0YCG3 227 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
PRAME-203ENST00000402697 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
PRAME-203ENST00000402697 RTN2O75298 545 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 TRIM49P0CI25 452 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 TRIM49CP0CI26 452 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 YWHABP31946 246 aaKnown RBP14.08□□□□□ -0.16
PRAME-203ENST00000402697 DNA2P51530 1060 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 MFAP3P55082 362 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 EIF3BP55884 814 aaKnown RBP14.08□□□□□ -0.16
PRAME-203ENST00000402697 PTENP60484 403 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 UBXN2AP68543 259 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 GPC5P78333 572 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 CROCCP2Q86T23 111 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 PIK3R5Q8WYR1 880 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 ZNF341Q9BYN7 854 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 HSPBP1Q9NZL4 362 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 HACL1Q9UJ83 578 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 COQ4Q9Y3A0 265 aa14.08□□□□□ -0.16
PRAME-203ENST00000402697 ZNF233A6NK53 670 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 MYO1CO00159 1063 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 FOXN3O00409 490 aaPredicted RBP14.07□□□□□ -0.16
PRAME-203ENST00000402697 EBAG9O00559 213 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 ZBED4O75132 1171 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 FAM153BP0C7A2 387 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 INPP5BP32019 993 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 RTP1P59025 263 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 FAM153CQ494X1 144 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 AGBL2Q5U5Z8 902 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 SMYD5Q6GMV2 418 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 ZNF746Q6NUN9 644 aaPredicted RBP14.07□□□□□ -0.16
PRAME-203ENST00000402697 B4GALNT4Q76KP1 1039 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 KIFAP3Q92845 792 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
PRAME-203ENST00000402697 BCAS3Q9H6U6 928 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 UBE2TQ9NPD8 197 aaPredicted RBP14.07□□□□□ -0.16
PRAME-203ENST00000402697 FAM153AQ9UHL3 310 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 RASAL2Q9UJF2 1139 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
PRAME-203ENST00000402697 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
PRAME-203ENST00000402697 ECHS1P30084 290 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 MXI1P50539 228 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 GNGT1P63211 74 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
PRAME-203ENST00000402697 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
PRAME-203ENST00000402697 DGKZQ13574 1117 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 FAM71AQ8IYT1 594 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 KCNN1Q92952 543 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 ARL8AQ96BM9 186 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 GPRASP2Q96D09 838 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 WNT8AQ9H1J5 351 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 TMBIM4Q9HC24 238 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 PHIPQ8WWQ0 1821 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.165e-24■□□□□ 10.9
PRAME-203ENST00000402697 MYZAPP0CAP1 466 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 OAZ1P54368 228 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 MRPS9P82933 396 aaKnown RBP14.06□□□□□ -0.16
PRAME-203ENST00000402697 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
PRAME-203ENST00000402697 RASSF4Q9H2L5 321 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 POLD4Q9HCU8 107 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 COL20A1Q9P218 1284 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 RSPH14Q9UHP6 348 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 GGA2Q9UJY4 613 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
PRAME-203ENST00000402697 POLR2AP24928 1970 aaKnown RBP14.06□□□□□ -0.16
PRAME-203ENST00000402697 PODXLO00592 558 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 NFIBO00712 420 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 KIAA0391O15091 583 aaKnown RBP14.05□□□□□ -0.16
PRAME-203ENST00000402697 STAM2O75886 525 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 FGGP02679 453 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 NR1D1P20393 614 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 CHRNA3P32297 505 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 GUCY2FP51841 1108 aa14.05□□□□□ -0.16
PRAME-203ENST00000402697 CORO7P57737 925 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms