RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 GABBR1Q9UBS5 961 aa18.37■□□□□ 0.53
DNMT3A-205ENST00000402667 NFU1Q9UMS0 254 aa18.37■□□□□ 0.53
DNMT3A-205ENST00000402667 EXOC7Q9UPT5 735 aa18.37■□□□□ 0.53
DNMT3A-205ENST00000402667 RLFQ13129 1914 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 BUB1BO60566 1050 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 SMTNP53814 917 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 OAZ1P54368 228 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 PPATQ06203 517 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 TSEN2Q8NCE0 465 aaKnown RBP18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 NSUN6Q8TEA1 469 aaKnown RBP18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 IFT81Q8WYA0 676 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 VTI1AQ96AJ9 217 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■□□□ 12.2
DNMT3A-205ENST00000402667 COL11A1P12107 1806 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-205ENST00000402667 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 ZNF862O60290 1169 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 RGS20O76081 388 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 KCNA2P16389 499 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 MXI1P50539 228 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 MCCD1P59942 119 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 DMP1Q13316 513 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 NNTQ13423 1086 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 TMEM132BQ14DG7 1078 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 ANGEL2Q5VTE6 544 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 OTUD6AQ7L8S5 288 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 CBWD2Q8IUF1 395 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 SLC20A1Q8WUM9 679 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 CASKIN2Q8WXE0 1202 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 ARHGEF26Q96DR7 871 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 THAP2Q9H0W7 228 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 AMFRQ9UKV5 643 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 FAM170AA1A519 330 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 ANKRD62A6NC57 917 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 PMM2O15305 246 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 STBD1O95210 358 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 CNGA1P29973 690 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 PAK2Q13177 524 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 MAP4K3Q8IVH8 894 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 RASGEF1CQ8N431 466 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 BSNDQ8WZ55 320 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 NOC2LQ9Y3T9 749 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 LTBP3Q9NS15 1303 aa18.35■□□□□ 0.53
DNMT3A-205ENST00000402667 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 SOX10P56693 466 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 TRADDQ15628 312 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 SNRNP35Q16560 246 aaKnown RBP18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 KAT5Q92993 513 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 HVCN1Q96D96 273 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 SAAL1Q96ER3 474 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 NTPCRQ9BSD7 190 aaKnown RBP18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 KMT5AQ9NQR1 393 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 USP20Q9Y2K6 914 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 TELO2Q9Y4R8 837 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 FAM153BP0C7A2 387 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 CAPN2P17655 700 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 FAM153CQ494X1 144 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 SWSAP1Q6NVH7 229 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 AFAP1L1Q8TED9 768 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 KIFAP3Q92845 792 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 ATP6V0A1Q93050 837 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 FAM153AQ9UHL3 310 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 KIAA1217Q5T5P2 1943 aa18.34■□□□□ 0.53
DNMT3A-205ENST00000402667 HNRNPH2P55795 449 aaKnown RBP18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 ALS2CLQ60I27 953 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 CATSPERGQ6ZRH7 1159 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 GOLGA6L1Q8N7Z2 621 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 SPIRE2Q8WWL2 714 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 CCDC127Q96BQ5 260 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 MTFR1LQ9H019 292 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 WDR81Q562E7 1941 aa18.33■□□□□ 0.53
DNMT3A-205ENST00000402667 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 SEMA4DQ92854 862 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 SH3GL2Q99962 352 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 C17orf75Q9HAS0 396 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.523e-10■■■■■ 153.8
DNMT3A-205ENST00000402667 COG5Q9UP83 839 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 PFASO15067 1338 aa18.33■□□□□ 0.52
DNMT3A-205ENST00000402667 TULP1O00294 542 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 KRIT1O00522 736 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 ATP2A1O14983 1001 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 PSAPP07602 524 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 USP8P40818 1118 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 SP4Q02446 784 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 KREMEN1Q96MU8 473 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 TEX13BQ9BXU2 312 aa18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-205ENST00000402667 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms