RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 MYH15Q9Y2K3 1946 aa13.36□□□□□ -0.27
LINC00544-201ENST00000400540 DEXIO95424 95 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 POMCP01189 267 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 CNPP09543 421 aaKnown RBP13.35□□□□□ -0.27
LINC00544-201ENST00000400540 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 NUBP1P53384 320 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 STK3Q13188 491 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00544-201ENST00000400540 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 MOXD1Q6UVY6 613 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 RUFY3Q7L099 469 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 GPR149Q86SP6 731 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 URGCPQ8TCY9 931 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
LINC00544-201ENST00000400540 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 MFSD1Q9H3U5 465 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 RSAD1Q9HA92 442 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 ZNF292O60281 2723 aa13.35□□□□□ -0.27
LINC00544-201ENST00000400540 PRR23AA6NEV1 266 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PROB1E7EW31 1015 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 F8W810 466 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 C2CD2LO14523 706 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 NRP1O14786 923 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 LILRB3O75022 631 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 MYBP10242 640 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 KLRC2P26717 231 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PSMA5P28066 241 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 CCDC149Q6ZUS6 474 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PGBD4Q96DM1 585 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
LINC00544-201ENST00000400540 PRG3Q9Y2Y8 225 aaPredicted RBP13.34□□□□□ -0.27
LINC00544-201ENST00000400540 VWA8A3KMH1 1905 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 CPLX1O14810 134 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 ZBTB39O15060 712 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 PI15O43692 258 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 NPR3P17342 541 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 NBL1P41271 181 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 SMG8Q8ND04 991 aaKnown RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 PSPC1Q8WXF1 523 aaKnown RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 ACSF2Q96CM8 615 aaPredicted RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 LXNQ9BS40 222 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 EMILIN2Q9BXX0 1053 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 EIF2AQ9BY44 585 aaKnown RBP13.33□□□□□ -0.28
LINC00544-201ENST00000400540 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
LINC00544-201ENST00000400540 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 FANCMQ8IYD8 2048 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 NARSO43776 548 aaKnown RBP13.32□□□□□ -0.28
LINC00544-201ENST00000400540 SOD2P04179 222 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
LINC00544-201ENST00000400540 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
LINC00544-201ENST00000400540 CLCN5P51795 746 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 AK2P54819 239 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 TDGQ13569 410 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 EMC2Q15006 297 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
LINC00544-201ENST00000400540 OTOP3Q7RTS5 596 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 SRGAP1Q7Z6B7 1085 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 HAS1Q92839 578 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 MRPL17Q9NRX2 175 aaKnown RBP13.32□□□□□ -0.28
LINC00544-201ENST00000400540 MIOSQ9NXC5 875 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 DUSP12Q9UNI6 340 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms