RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 CYP11B2P19099 503 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 IRS1P35568 1242 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 PPM1AP35813 382 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 NAMPTP43490 491 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 CEBPZQ03701 1054 aaKnown RBP9.31□□□□□ -0.92
USP16-202ENST00000399973 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 RESTQ13127 1097 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 PPP2R5AQ15172 486 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
USP16-202ENST00000399973 CSPP1Q1MSJ5 1256 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 NOMO2Q5JPE7 1267 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 UBXN11Q5T124 520 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 KCNT2Q6UVM3 1135 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 LRRC55Q6ZSA7 311 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 CABP7Q86V35 215 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 PPP2R3CQ969Q6 453 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 CCDC51Q96ER9 411 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 INTS4Q96HW7 963 aaKnown RBP9.31□□□□□ -0.92
USP16-202ENST00000399973 IFT74Q96LB3 600 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 RUSC1Q9BVN2 902 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 C2orf40Q9H1Z8 148 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 NXF3Q9H4D5 531 aaKnown RBP9.31□□□□□ -0.92
USP16-202ENST00000399973 RSAD1Q9HA92 442 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 ENTPD7Q9NQZ7 604 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 CLDND1Q9NY35 253 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 HES2Q9Y543 173 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 IPPQ9Y573 584 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 PDCD11Q14690 1871 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 NT5C1B-RDH14C9J2C7 533 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 H3BQ06 376 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 EYA4O95677 639 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 PRKCBP05771 671 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 ARF4P18085 180 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 AXLP30530 894 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 HOXA11P31270 313 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 MLH1P40692 756 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 UBA7P41226 1012 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 PRPF4BQ13523 1007 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 DHX8Q14562 1220 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
USP16-202ENST00000399973 CLUL1Q15846 466 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 AMHR2Q16671 573 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 NAALADL2Q58DX5 795 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 PLPP4Q5VZY2 271 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 ARL6IP4Q66PJ3 421 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 CDCA2Q69YH5 1023 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 AGMOQ6ZNB7 445 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 ADGRD2Q7Z7M1 963 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 HACE1Q8IYU2 909 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 SPPL3Q8TCT6 385 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 SYMPKQ92797 1274 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 CALML4Q96GE6 196 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 TMEM169Q96HH4 297 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 MMTAG2Q9BU76 263 aaKnown RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 TRAIPQ9BWF2 469 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 NT5C3AQ9H0P0 336 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 CSRNP2Q9H175 543 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 TLR9Q9NR96 1032 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 TBC1D13Q9NVG8 400 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 PRMT7Q9NVM4 692 aaPredicted RBP9.3□□□□□ -0.92
USP16-202ENST00000399973 USP20Q9Y2K6 914 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 CITO14578 2027 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 TRIP11Q15643 1979 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
USP16-202ENST00000399973 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 LINC01565O15544 149 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 STX6O43752 255 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 HIP1RO75146 1068 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 POMCP01189 267 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 KRT18P05783 430 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.92
USP16-202ENST00000399973 NRIP1P48552 1158 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 ALDH7A1P49419 539 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 NDUFV1P49821 464 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 PEX3P56589 373 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 BCAR1P56945 870 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 UBE3AQ05086 875 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 GRIN1Q05586 938 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 HYAL1Q12794 435 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 DMP1Q13316 513 aaPredicted RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 CAMK1Q14012 370 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 MAPK6Q16659 721 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms