RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 TMEM161BQ8NDZ6 487 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 HNRNPLLQ8WVV9 542 aaKnown RBP12.77□□□□□ -0.37
COL25A1-202ENST00000399127 ELMO3Q96BJ8 720 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 STK33Q9BYT3 514 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 SEPT11Q9NVA2 429 aaKnown RBP12.77□□□□□ -0.37
COL25A1-202ENST00000399127 SLC9A2Q9UBY0 812 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 TBX20Q9UMR3 447 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 FERP16591 822 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 NCKAP1LP55160 1127 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 PRKCEQ02156 737 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 SEPT14Q6ZU15 432 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.37
COL25A1-202ENST00000399127 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 GOLGA6L1Q8N7Z2 621 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
COL25A1-202ENST00000399127 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
COL25A1-202ENST00000399127 PLEKHA4Q9H4M7 779 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 KMT5AQ9NQR1 393 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 PCDHGC5Q9Y5F6 944 aa12.77□□□□□ -0.37
COL25A1-202ENST00000399127 PFASO15067 1338 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 FOXN3O00409 490 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 MYBL2P10244 700 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 MAPTP10636 758 aaKnown RBP12.76□□□□□ -0.37
COL25A1-202ENST00000399127 SMTNP53814 917 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 SLC7A5Q01650 507 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ALCAMQ13740 583 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
COL25A1-202ENST00000399127 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ARHGEF19Q8IW93 802 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 LMO3Q8TAP4 145 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ATP6V0A1Q93050 837 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 LRRC1Q9BTT6 524 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 UBE2TQ9NPD8 197 aaPredicted RBP12.76□□□□□ -0.37
COL25A1-202ENST00000399127 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ADGRA3Q8IWK6 1321 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 MAFGO15525 162 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 STBD1O95210 358 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 PSAPP07602 524 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 PRLRP16471 622 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ABCB4P21439 1286 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 CNGA1P29973 690 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 MTERF2Q49AM1 385 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 WDR93Q6P2C0 686 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 KAT5Q92993 513 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 PAGR1Q9BTK6 254 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 RRAGCQ9HB90 399 aa12.76□□□□□ -0.37
COL25A1-202ENST00000399127 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
COL25A1-202ENST00000399127 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 OAS2P29728 719 aaKnown RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 USP8P40818 1118 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SNRNP35Q16560 246 aaKnown RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 TOPORSQ9NS56 1045 aaPredicted RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 DMGDHQ9UI17 866 aaKnown RBP12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 MAP2K7O14733 419 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 H2AFZP0C0S5 128 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 PAFAH1B1P43034 410 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 PPATQ06203 517 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 ABHD15Q6UXT9 468 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 H2AFVQ71UI9 128 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 HDXQ7Z353 690 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SRLQ86TD4 932 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 OPTNQ96CV9 577 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 TMEM117Q9H0C3 514 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 CYP26B1Q9NR63 512 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
COL25A1-202ENST00000399127 LCTP09848 1927 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 H3BQF6 201 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 HNRNPDLO14979 420 aaKnown RBP12.74□□□□□ -0.37
COL25A1-202ENST00000399127 MXI1P50539 228 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 GALCP54803 685 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms