RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ZNF18P17022 549 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 CAV1Q03135 178 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 BEST2Q8NFU1 509 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 SCYL1Q96KG9 808 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 ASNSD1Q9NWL6 643 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 TBK1Q9UHD2 729 aa15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 PACSIN2Q9UNF0 486 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA11-201ENST00000398587 ACSL3O95573 720 aa15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 CDO1Q16878 200 aa15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 CATSPER3Q86XQ3 398 aa15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 EPC1Q9H2F5 836 aa15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.02
PCDHGA11-201ENST00000398587 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 SYT2Q8N9I0 419 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 SEPT1Q8WYJ6 367 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 DEFB129Q9H1M3 183 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 GGPS1O95749 300 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 TERF2Q15554 542 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 RHOT1Q8IXI2 618 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 RNF149Q8NC42 400 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 NOC2LQ9Y3T9 749 aaKnown RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 AFG3L2Q9Y4W6 797 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 FAM205AQ6ZU69 1335 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 RTN2O75298 545 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 GMPSP49915 693 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 GRB10Q13322 594 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 SAT1P21673 171 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 ARL13BQ3SXY8 428 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 PFDN4Q9NQP4 134 aa15.2■□□□□ 0.02
PCDHGA11-201ENST00000398587 ESYT3A0FGR9 886 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 CYP26A1O43174 497 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 HUS1O60921 280 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 KRT7P08729 469 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 TXNP10599 105 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 TPD52P55327 224 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 HSPH1Q92598 858 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 DNAJC17Q9NVM6 304 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 IQCA1LA6NCM1 817 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 MYL3P08590 195 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 RPS6KA2Q15349 733 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 PPP6R3Q5H9R7 873 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 TWF2Q6IBS0 349 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 VCX3BQ9H321 246 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 ANKEF1Q9NU02 776 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 LRFN2Q9ULH4 789 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 MSH4O15457 936 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 EVI5O60447 810 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 CYP11B2P19099 503 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 ECE1P42892 770 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 GALCP54803 685 aa15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-201ENST00000398587 SLC9A1P19634 815 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 CA4P22748 312 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 CIITAP33076 1130 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 PSMC1P62191 440 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SNRNP35Q16560 246 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ZC2HC1CQ53FD0 456 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RNF139Q8WU17 664 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 GMCL1Q96IK5 515 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SLC4A9Q96Q91 983 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 GGA3Q9NZ52 723 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 FHOD1Q9Y613 1164 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 PRKCBP05771 671 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 CAP2P40123 477 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ARL4CP56559 192 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 KYAT1Q16773 422 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RDM1Q8NG50 284 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ACER1Q8TDN7 264 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 COG1Q8WTW3 980 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RUBCNQ92622 972 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 GCOM2Q9BZD3 368 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RRP15Q9Y3B9 282 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SDC4P31431 198 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 GSPT2Q8IYD1 628 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RNPC3Q96LT9 517 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ELP3Q9H9T3 547 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SAYSD1Q9NPB0 183 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 FBXO28Q9NVF7 368 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 GGCXP38435 758 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 RPS6P62753 249 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 MXD4Q14582 209 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 NAB2Q15742 525 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 KSR1Q8IVT5 923 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SYN2Q92777 582 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 ATG4CQ96DT6 458 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms