RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 RHOBTB2Q9BYZ6 727 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 LMAN2LQ9H0V9 348 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 NLRC5Q86WI3 1866 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 SPDYE3A6NKU9 549 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
UBE3A-202ENST00000397954 SPATA31C2B4DYI2 1134 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 PFKFB2O60825 505 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 SNAI1O95863 264 aaPredicted RBP4.25□□□□□ -1.73
UBE3A-202ENST00000397954 CLTBP09497 229 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 XRCC6P12956 609 aaKnown RBP eCLIP4.25□□□□□ -1.733e-10■■■■■ 28.4
UBE3A-202ENST00000397954 ADCY7P51828 1080 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 WWC2Q6AWC2 1192 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 PPP4R3AQ6IN85 833 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 TAPT1Q6NXT6 567 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 ERAP2Q6P179 960 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 KRBA2Q6ZNG9 492 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 RSPH3Q86UC2 560 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 SLFN12Q8IYM2 578 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 VPS37AQ8NEZ2 397 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 FAM20AQ96MK3 541 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 SEC62Q99442 399 aaKnown RBP4.25□□□□□ -1.73
UBE3A-202ENST00000397954 LGR4Q9BXB1 951 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 WDR11Q9BZH6 1224 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 MIR1-1HGQ9H1L0 117 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 ZNF180Q9UJW8 692 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 UBIAD1Q9Y5Z9 338 aa4.25□□□□□ -1.73
UBE3A-202ENST00000397954 KAT6AQ92794 2004 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GABRDO14764 452 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 NCK2O43639 380 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 F2P00734 622 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TIMP1P01033 207 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PGRP06401 933 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SCG2P13521 617 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TARSP26639 723 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 METAP2P50579 478 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ANTXR2P58335 489 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 POU5F1Q01860 360 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TYRO3Q06418 890 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 MPP2Q14168 576 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PGM5Q15124 567 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 INO80DQ53TQ3 878 aaPredicted RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 KIAA1755Q5JYT7 1200 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ARHGEF16Q5VV41 709 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ATL3Q6DD88 541 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 NFXL1Q6ZNB6 911 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TLK2Q86UE8 772 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CCNJLQ8IV13 435 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GPATCH11Q8N954 259 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 RIN3Q8TB24 985 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ITPKCQ96DU7 683 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CCDC51Q96ER9 411 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GDF15Q99988 308 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PDCD2LQ9BRP1 358 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 FTHL17Q9BXU8 183 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 JADE2Q9NQC1 790 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TOMM22Q9NS69 142 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 KLF15Q9UIH9 416 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 POLR3KQ9Y2Y1 108 aaPredicted RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 MRPS23Q9Y3D9 190 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PCDHA1Q9Y5I3 950 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 NRCAMQ92823 1304 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 IGKV6D-21A0A0A0MT36 114 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 A0A1W2PQ45 241 aaPredicted RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 A0A1W2PQY0 241 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GOLGA8AA7E2F4 631 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GOLGA8BA8MQT2 603 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 MAGEB2O15479 319 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SIAH2O43255 324 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ST18O60284 1047 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CILPO75339 1184 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SASH3O75995 380 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CXCL10P02778 98 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ALAS1P13196 640 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 EDN3P14138 238 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CYP2B6P20813 491 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ACLYP53396 1101 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 FSCN1Q16658 493 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 GRAMD1BQ3KR37 738 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 FAM47AQ5JRC9 791 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 ZNF484Q5JVG2 852 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CELF3Q5SZQ8 465 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 MFSD5Q6N075 450 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CYB5R4Q7L1T6 521 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SLC17A8Q8NDX2 589 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SMARCC2Q8TAQ2 1214 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CRYGNQ8WXF5 182 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 HERVK_113Q902F9 699 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 LBHD1Q9BQE6 289 aaPredicted RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SDF4Q9BRK5 362 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SMARCAD1Q9H4L7 1026 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 RAVER2Q9HCJ3 691 aaKnown RBP4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TRHDEQ9UKU6 1024 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 TBX21Q9UL17 535 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 SNX14Q9Y5W7 946 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 CYP2D7A0A087X1C5 515 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 LYPLA2O95372 231 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 EMP3P54852 163 aa4.24□□□□□ -1.73
UBE3A-202ENST00000397954 RPS6P62753 249 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms