RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 IKZF4Q9H2S9 585 aa18.67■□□□□ 0.58
EWSR1-206ENST00000397938 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
EWSR1-206ENST00000397938 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
EWSR1-206ENST00000397938 ARL2BPQ9Y2Y0 163 aa18.67■□□□□ 0.58
EWSR1-206ENST00000397938 A8MUI8 341 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 SKAP2O75563 359 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 TCEAL1Q15170 157 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 ZKSCAN8Q15776 578 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 PRR16Q569H4 304 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 VSTM1Q6UX27 236 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 KCTD1Q719H9 257 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 ASRGL1Q7L266 308 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 SPATA21Q7Z572 469 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 CRYGNQ8WXF5 182 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 ARHGEF2Q92974 986 aaKnown RBP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 BHMT2Q9H2M3 363 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 CTTNBP2NLQ9P2B4 639 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 TBX3O15119 743 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 COILP38432 576 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 IRX1P78414 480 aaPredicted RBP18.66■□□□□ 0.58
EWSR1-206ENST00000397938 LONRF1Q17RB8 773 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 NUGGCQ68CJ6 796 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 AGPAT1Q99943 283 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 RXFP1Q9HBX9 757 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 CD209Q9NNX6 404 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 PNMA3Q9UL41 463 aa18.66■□□□□ 0.58
EWSR1-206ENST00000397938 PASKQ96RG2 1323 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 GAP43P17677 238 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 MSH2P43246 934 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 PEX5P50542 639 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 ARHGAP4P98171 946 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 MAP2K1Q02750 393 aaPredicted RBP18.65■□□□□ 0.58
EWSR1-206ENST00000397938 GRIK3Q13003 919 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 ERICH1Q86X53 443 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 SERPINB12Q96P63 405 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 RPS6KC1Q96S38 1066 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CDC42EP4Q9H3Q1 356 aaKnown RBP18.65■□□□□ 0.58
EWSR1-206ENST00000397938 PRKAG3Q9UGI9 489 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 TMEM110-MUSTN1A8MSY1 372 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CREB1P16220 341 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 GRAPQ13588 217 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 ARHGAP44Q17R89 818 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CCDC25Q86WR0 208 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CCDC105Q8IYK2 499 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 FITM2Q8N6M3 262 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 GRAPLQ8TC17 118 aaPredicted RBP18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CKAP2Q8WWK9 683 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 DDX23Q9BUQ8 820 aaKnown RBP18.65■□□□□ 0.58
EWSR1-206ENST00000397938 STK24Q9Y6E0 443 aa18.65■□□□□ 0.58
EWSR1-206ENST00000397938 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.58
EWSR1-206ENST00000397938 AP3B2Q13367 1082 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 Q4G0T1 1027 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 NAIF1Q69YI7 327 aaPredicted RBP18.64■□□□□ 0.57
EWSR1-206ENST00000397938 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 LENG9Q96B70 501 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 SPDL1Q96EA4 605 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
EWSR1-206ENST00000397938 PTPN22Q9Y2R2 807 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 TCRBV7S2A1N4TA0A589 114 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 KCNQ2O43526 872 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 EYA4O95677 639 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 ATP5DP30049 168 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 CCNHP51946 323 aaPredicted RBP18.64■□□□□ 0.57
EWSR1-206ENST00000397938 MYL7Q01449 175 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 CYP4A11Q02928 519 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 RRP1BQ14684 758 aaKnown RBP18.64■□□□□ 0.57
EWSR1-206ENST00000397938 SLC20A1Q8WUM9 679 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 ADAM22Q9P0K1 906 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 MTUS1Q9ULD2 1270 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 STK38LQ9Y2H1 464 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 RABGAP1Q9Y3P9 1069 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 PCDHA1Q9Y5I3 950 aa18.64■□□□□ 0.57
EWSR1-206ENST00000397938 SFI1A8K8P3 1242 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 LRRN2O75325 713 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 SMNDC1O75940 238 aaKnown RBP eCLIP18.63■□□□□ 0.576e-11■■■□□ 15.9
EWSR1-206ENST00000397938 TRIM49P0CI25 452 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 TRIM49CP0CI26 452 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 PYGMP11217 842 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 COMTP21964 271 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 POLD1P28340 1107 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 NMT1P30419 496 aaKnown RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 HSPA2P54652 639 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 KCNQ4P56696 695 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 SIX1Q15475 284 aaPredicted RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 SLC15A2Q16348 729 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 SLC13A5Q86YT5 568 aaPredicted RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 AAASQ9NRG9 546 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 FOXN3O00409 490 aaPredicted RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 MEIS2O14770 477 aa18.63■□□□□ 0.57
EWSR1-206ENST00000397938 FTLP02792 175 aaPredicted RBP18.63■□□□□ 0.57
EWSR1-206ENST00000397938 PICALMQ13492 652 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms