RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 KCNK9Q9NPC2 374 aa14.83□□□□□ -0.04
COL6A2-203ENST00000397763 GRHL1Q9NZI5 618 aa14.83□□□□□ -0.04
COL6A2-203ENST00000397763 CDK5RAP2Q96SN8 1893 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 CCT8L1PA6NM43 557 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 A8MUI8 341 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 CES2O00748 559 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 LMNB1P20700 586 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 PPP1R18Q6NYC8 613 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 BARGINQ6ZT62 677 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ATG4AQ8WYN0 398 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 STK33Q9BYT3 514 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 VAV3Q9UKW4 847 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 STK38LQ9Y2H1 464 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 COL16A1Q07092 1604 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 PCNTO95613 3336 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 SLITRK3O94933 977 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ATP6V1G2O95670 118 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 TMEM253P0C7T8 217 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 DLATP10515 647 aaKnown RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 VCAM1P19320 739 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 KCNJ2P63252 427 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ELF3P78545 371 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ICA1Q05084 483 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 LLGL2Q6P1M3 1020 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 PRUNE1Q86TP1 453 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ATXN2LQ8WWM7 1075 aaKnown RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 BORCS6Q96GS4 357 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 RSRC1Q96IZ7 334 aaKnown RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ZNF317Q96PQ6 595 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 WDR18Q9BV38 432 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 AMNQ9BXJ7 453 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 FGFR1OP2Q9NVK5 253 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL6A2-203ENST00000397763 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
COL6A2-203ENST00000397763 SGPL1O95470 568 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 GH1P01241 217 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 SSTR3P32745 418 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 GCKP35557 465 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 DRP2Q13474 957 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 C1orf131Q8NDD1 294 aaKnown RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 ZC3H12CQ9C0D7 883 aaKnown RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 LRRC4BQ9NT99 713 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 FRMD4BQ9Y2L6 1034 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 EMSYQ7Z589 1322 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 MAST2Q6P0Q8 1798 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 SBF2Q86WG5 1849 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 UPP2O95045 317 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 APOBEC3HQ6NTF7 200 aaKnown RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 HS2ST1Q7LGA3 356 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 HOOK3Q86VS8 718 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 PCDHB18PQ96TA0 734 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 AGPAT3Q9NRZ7 376 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 APEX2Q9UBZ4 518 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-203ENST00000397763 SPOPO43791 374 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 NDUFB10O96000 172 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 SLC8A1P32418 973 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 FOXR2Q6PJQ5 311 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 CCDC50Q8IVM0 306 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 ANKS4BQ8N8V4 417 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 TBC1D22AQ8WUA7 517 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 AGPAT1Q99943 283 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 TXLNGYQ9BZA5 131 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 PARVGQ9HBI0 331 aa14.81□□□□□ -0.04
COL6A2-203ENST00000397763 C5orf60A6NFR6 353 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 RASGRF2O14827 1237 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 UBOX5O94941 541 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 EYA4O95677 639 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 HP1BP3Q5SSJ5 553 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-203ENST00000397763 MICAL1Q8TDZ2 1067 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 CCDC127Q96BQ5 260 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 MRRFQ96E11 262 aaKnown RBP14.8□□□□□ -0.04
COL6A2-203ENST00000397763 FAXDC2Q96IV6 333 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 TRIM7Q9C029 511 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 TCP11X1B4DZS4 312 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 CLDN3O15551 220 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 CYP26A1O43174 497 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 ECE1P42892 770 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 PTGIRP43119 386 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 PPP3CAQ08209 521 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.8□□□□□ -0.042e-6■■■■■ 76.2
COL6A2-203ENST00000397763 SEC14L1Q92503 715 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 SPDL1Q96EA4 605 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 RBM17Q96I25 401 aaKnown RBP14.8□□□□□ -0.04
COL6A2-203ENST00000397763 CBWD1Q9BRT8 395 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 SAMD15Q9P1V8 674 aa14.8□□□□□ -0.04
COL6A2-203ENST00000397763 A0A0A6YYK5 440 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-203ENST00000397763 CCDC189A1A4V9 331 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 GJC1P36383 396 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 PPM1KQ8N3J5 372 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 CARD9Q9H257 536 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 CCDC169A6NNP5 214 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 PPIP5K2O43314 1243 aa14.79□□□□□ -0.04
COL6A2-203ENST00000397763 GH2P01242 217 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms