RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TCHHQ07283 1943 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 TBCAO75347 108 aaKnown RBP27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 PLS3P13797 630 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 ERVK-21P61565 698 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 MAPK7Q13164 816 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 PRPF4BQ13523 1007 aaKnown RBP27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 LONRF3Q496Y0 759 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 SHC4Q6S5L8 630 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 LEO1Q8WVC0 666 aaPredicted RBP27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 MYLIPQ8WY64 445 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 CHAMP1Q96JM3 812 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 GUCD1Q96NT3 240 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 SAMD11Q96NU1 681 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 REEP2Q9BRK0 252 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 SCAND2PQ9GZW5 306 aaPredicted RBP27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 FZD8Q9H461 694 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 ODF2LQ9ULJ1 636 aa27.97■■■□□ 2.07
TSPAN4-207ENST00000397411 SLC16A4O15374 487 aa27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 B4GALT5O43286 388 aa27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 ARF4P18085 180 aaPredicted RBP27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 AXDND1Q5T1B0 1012 aaPredicted RBP27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 PPP4R3CPQ6ZMV5 832 aa27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 MYCT1Q8N699 235 aa27.96■■■□□ 2.07
TSPAN4-207ENST00000397411 PHLPP2Q6ZVD8 1323 aa27.95■■■□□ 2.07
TSPAN4-207ENST00000397411 ACKR2O00590 384 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 GIT2Q14161 759 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 AMHR2Q16671 573 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 FAM187BQ17R55 369 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 TPRNQ4KMQ1 711 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 DYMQ7RTS9 669 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 IQUBQ8NA54 791 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 CNNM3Q8NE01 707 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 FBXO22Q8NEZ5 403 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 DHX58Q96C10 678 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 C17orf80Q9BSJ5 609 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 TMEM117Q9H0C3 514 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 RWDD3Q9Y3V2 267 aa27.95■■■□□ 2.06
TSPAN4-207ENST00000397411 ZNF623O75123 536 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 IGFBP4P22692 258 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 TMEM192Q8IY95 271 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 HACE1Q8IYU2 909 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 SPIRE2Q8WWL2 714 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 LPPQ93052 612 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 TMEM134Q9H6X4 195 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 PARVGQ9HBI0 331 aa27.94■■■□□ 2.06
TSPAN4-207ENST00000397411 A0A087X0B3 334 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 H0YCG3 227 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 RFXAPO00287 272 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 N4BP3O15049 544 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 FOSL2P15408 326 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 CTNNB1P35222 781 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 STRN3Q13033 797 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 NAALADL2Q58DX5 795 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 UBXN11Q5T124 520 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 SLC27A1Q6PCB7 646 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 GLB1LQ6UWU2 654 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 SPRED2Q7Z698 418 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 ZNF598Q86UK7 904 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 CDR2LQ86X02 465 aaPredicted RBP27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 HELQQ8TDG4 1101 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 ADPGKQ9BRR6 497 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 NTPCRQ9BSD7 190 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 LRRC27Q9C0I9 530 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 CCDC113Q9H0I3 377 aa27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 RC3H2Q9HBD1 1191 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 MRPL42Q9Y6G3 142 aaKnown RBP27.93■■■□□ 2.06
TSPAN4-207ENST00000397411 FNDC1Q4ZHG4 1894 aaPredicted RBP27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 A0A1B0GUA9 196 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 NPTXRO95502 500 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 ITGA4P13612 1032 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 EPC2Q52LR7 807 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 RESP18Q5W5W9 173 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 APBB1IPQ7Z5R6 666 aaPredicted RBP27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 PYM1Q9BRP8 204 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 EIF2AQ9BY44 585 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 CUEDC2Q9H467 287 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 AAASQ9NRG9 546 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 CNTNAP2Q9UHC6 1331 aa27.92■■■□□ 2.06
TSPAN4-207ENST00000397411 POLR2DO15514 142 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 BMPR1AP36894 532 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 AMPD3Q01432 767 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 ADALQ6DHV7 355 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 MRPL10Q7Z7H8 261 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 DDX12PQ92771 950 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 CASD1Q96PB1 797 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 APOL6Q9BWW8 343 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 UBN1Q9NPG3 1134 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 INPP5FQ9Y2H2 1132 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 USP20Q9Y2K6 914 aa27.91■■■□□ 2.06
TSPAN4-207ENST00000397411 NLRC5Q86WI3 1866 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 MYMKA6NI61 221 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 GTPBP6O43824 516 aaPredicted RBP27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 ATF7P17544 494 aaPredicted RBP27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 CLLU1OSQ5K130 101 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 MRPL4Q9BYD3 311 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 RNF19AQ9NV58 838 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 TYW1Q9NV66 732 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 ARHGAP28Q9P2N2 729 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 KCNH3Q9ULD8 1083 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 CIZ1Q9ULV3 898 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms