RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZNF804AQ7Z570 1209 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 SLC30A5Q8TAD4 765 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ERMNQ8TAM6 284 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 KLHL29Q96CT2 875 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 THAP2Q9H0W7 228 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ZFATQ9P243 1243 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 CNOT7Q9UIV1 285 aaKnown RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 CORO1CQ9ULV4 474 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 SLC16A3O15427 465 aaKnown RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 PHF2O75151 1096 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 AKR1B1P15121 316 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 KCNA1Q09470 495 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 PICALMQ13492 652 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 CNGA2Q16280 664 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ARHGAP44Q17R89 818 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 OTUD6AQ7L8S5 288 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 KSR1Q8IVT5 923 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 FAM186BQ8IYM0 893 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 MLXIPLQ9NP71 852 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 FGFR1OP2Q9NVK5 253 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 TAS2R14Q9NYV8 317 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 GRHL1Q9NZI5 618 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ZMYND8Q9ULU4 1186 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 USP15Q9Y4E8 981 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ASTN1O14525 1302 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 GPR75-ASB3A0A0A6YYF3 556 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 TCP11X1B4DZS4 312 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SUN1O94901 812 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CHRNA3P32297 505 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 NCALDP61601 193 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CYP4A11Q02928 519 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 BLMHQ13867 455 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ZNF268Q14587 947 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CLUL1Q15846 466 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PRR16Q569H4 304 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 EPM2AIP1Q7L775 607 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ZNF513Q8N8E2 541 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 B4GALNT2Q8NHY0 566 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 TAOK3Q9H2K8 898 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CCDC134Q9H6E4 229 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 BCAS3Q9H6U6 928 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CTTNBP2NLQ9P2B4 639 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PTPN22Q9Y2R2 807 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ALG6Q9Y672 507 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 RPS6KL1Q9Y6S9 549 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SFI1A8K8P3 1242 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PODXLO00592 558 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ZBTB5O15062 677 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 RIPK2O43353 540 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 RARAP10276 462 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PTGIRP43119 386 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 AUHQ13825 339 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SLMAPQ14BN4 828 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PPP1R15BQ5SWA1 713 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 BTNL9Q6UXG8 535 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 TPTE2Q6XPS3 522 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SLFN12Q8IYM2 578 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 UBL4BQ8N7F7 174 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PRELID2Q8N945 189 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD42Q8N9B4 389 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SYT2Q8N9I0 419 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 KCNMB3Q9NPA1 279 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 LAMB2P55268 1798 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SYNGAP1Q96PV0 1343 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 GTPBP10A4D1E9 387 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD62A6NC57 917 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 LRRN2O75325 713 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 VCAM1P19320 739 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 GBP1P32455 592 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 PSMC2P35998 433 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 POLE2P56282 527 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 NUGGCQ68CJ6 796 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CWF19L1Q69YN2 538 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 CCDC137Q6PK04 289 aaKnown RBP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 LINC00116Q8NCU8 138 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 KRT35Q92764 455 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 ANO3Q9BYT9 981 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 IKZF4Q9H2S9 585 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 KCNK9Q9NPC2 374 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAPN3-206ENST00000397163 COG5Q9UP83 839 aa9.86□□□□□ -0.83
CAPN3-206ENST00000397163 IRS2Q9Y4H2 1338 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 H0Y3Z8 333 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TTLL1O95922 423 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 SNHG28P0DPA3 235 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 PYGBP11216 843 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 ATP2A2P16615 1042 aaKnown RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 HSPA6P17066 643 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 NOVP48745 357 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 MARCKSL1P49006 195 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms