RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KIAA1671Q9BY89 1806 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 FGF18O76093 207 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 NAMPTP43490 491 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 RESTQ13127 1097 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 TCEAL5Q5H9L2 206 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 KCNT2Q6UVM3 1135 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 POF1BQ8WVV4 589 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 PRIMPOLQ96LW4 560 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 PRMT7Q9NVM4 692 aaPredicted RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 CNTNAP2Q9UHC6 1331 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 NCLP19338 710 aaKnown RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 PLCB3Q01970 1234 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 AMHR2Q16671 573 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 FAM187BQ17R55 369 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 NOMO2Q5JPE7 1267 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 CDCA2Q69YH5 1023 aaPredicted RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 PDE12Q6L8Q7 609 aaKnown RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 HACE1Q8IYU2 909 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 LPPQ93052 612 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 UBE2ZQ9H832 354 aaPredicted RBP16.1■□□□□ 0.17
SEC13-208ENST00000397109 LZTS1Q9Y250 596 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
SEC13-208ENST00000397109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 E9PMD0 336 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 OFD1O75665 1012 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 F13A1P00488 732 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 ARF4P18085 180 aaPredicted RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 ALDH7A1P49419 539 aaKnown RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 TFF2Q03403 129 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 KRT17Q04695 432 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 GSE1Q14687 1217 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 MAPK6Q16659 721 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 CPB2Q96IY4 423 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 COL25A1Q9BXS0 654 aaPredicted RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 TRIM6Q9C030 488 aaPredicted RBP16.09■□□□□ 0.17
SEC13-208ENST00000397109 FZD8Q9H461 694 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 RSAD1Q9HA92 442 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 SPG21Q9NZD8 308 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 KANSL3Q9P2N6 904 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 HCSTQ9UBK5 93 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
SEC13-208ENST00000397109 TTC28Q96AY4 2481 aa16.08■□□□□ 0.17
SEC13-208ENST00000397109 NCOR1O75376 2440 aa16.08■□□□□ 0.17
SEC13-208ENST00000397109 ITGA4P13612 1032 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 DNAJB1P25685 340 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 UBA7P41226 1012 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 EFNA5P52803 228 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 RNASELQ05823 741 aaKnown RBP16.08■□□□□ 0.16
SEC13-208ENST00000397109 CAMK1Q14012 370 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 AGMOQ6ZNB7 445 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 CABP7Q86V35 215 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 BSNDQ8WZ55 320 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
SEC13-208ENST00000397109 PABPC5Q96DU9 382 aaKnown RBP16.08■□□□□ 0.16
SEC13-208ENST00000397109 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 TLR9Q9NR96 1032 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 INPP5FQ9Y2H2 1132 aa16.08■□□□□ 0.16
SEC13-208ENST00000397109 A0A1B0GUA9 196 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 BCAR1P56945 870 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 RINT1Q6NUQ1 792 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 KCNK18Q7Z418 384 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
SEC13-208ENST00000397109 SMG8Q8ND04 991 aaKnown RBP16.07■□□□□ 0.16
SEC13-208ENST00000397109 MICAL1Q8TDZ2 1067 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 DRC1Q96MC2 740 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 PNMA5Q96PV4 448 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
SEC13-208ENST00000397109 C17orf75Q9HAS0 396 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 TBC1D13Q9NVG8 400 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 KCND2Q9NZV8 630 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 IPPQ9Y573 584 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 REV3LO60673 3130 aa16.07■□□□□ 0.16
SEC13-208ENST00000397109 PHLPP2Q6ZVD8 1323 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 MEIS3P2A8K0S8 358 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 ACKR2O00590 384 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 N4BP3O15049 544 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 B4GALT5O43286 388 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 TRAK2O60296 914 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 PRKCBP05771 671 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 BMP1P13497 986 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
SEC13-208ENST00000397109 TMEM132AQ24JP5 1023 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms