RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CNGA2Q16280 664 aa15.04■□□□□ -0
NUP98-204ENST00000397004 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
NUP98-204ENST00000397004 TPH2Q8IWU9 490 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CTNNBL1Q8WYA6 563 aaPredicted RBP15.04■□□□□ -0
NUP98-204ENST00000397004 TMEM110-MUSTN1A8MSY1 372 aa15.03■□□□□ -0
NUP98-204ENST00000397004 TBX3O15119 743 aa15.03■□□□□ -0
NUP98-204ENST00000397004 OAS1P00973 400 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 FTLP02792 175 aaPredicted RBP15.03■□□□□ -0
NUP98-204ENST00000397004 GYS1P13807 737 aa15.03■□□□□ -0
NUP98-204ENST00000397004 COMTP21964 271 aa15.03■□□□□ -0
NUP98-204ENST00000397004 MMP14P50281 582 aa15.03■□□□□ -0
NUP98-204ENST00000397004 SLC15A2Q16348 729 aa15.03■□□□□ -0
NUP98-204ENST00000397004 FAM133BQ5BKY9 247 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 TBC1D22AQ8WUA7 517 aa15.03■□□□□ -0
NUP98-204ENST00000397004 PWWP2AQ96N64 755 aa15.03■□□□□ -0
NUP98-204ENST00000397004 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
NUP98-204ENST00000397004 STRA6Q9BX79 667 aa15.03■□□□□ -0
NUP98-204ENST00000397004 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
NUP98-204ENST00000397004 L3MBTL1Q9Y468 752 aa15.03■□□□□ -0
NUP98-204ENST00000397004 ANKRD62A6NC57 917 aa15.03■□□□□ -0
NUP98-204ENST00000397004 GHRP10912 638 aa15.03■□□□□ -0
NUP98-204ENST00000397004 RPL13P26373 211 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 EIF3BP55884 814 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
NUP98-204ENST00000397004 HIBCHQ6NVY1 386 aaPredicted RBP15.03■□□□□ -0
NUP98-204ENST00000397004 VPS36Q86VN1 386 aa15.03■□□□□ -0
NUP98-204ENST00000397004 RAB17Q9H0T7 212 aa15.03■□□□□ -0
NUP98-204ENST00000397004 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 A0A1W2PRG0 241 aa15.03■□□□□ -0
NUP98-204ENST00000397004 F5H6K3 240 aa15.03■□□□□ -0
NUP98-204ENST00000397004 CALCAP01258 141 aa15.03■□□□□ -0
NUP98-204ENST00000397004 RARAP10276 462 aa15.03■□□□□ -0
NUP98-204ENST00000397004 KRT13P13646 458 aa15.03■□□□□ -0
NUP98-204ENST00000397004 AP3B2Q13367 1082 aa15.03■□□□□ -0
NUP98-204ENST00000397004 AGPAT1Q99943 283 aa15.03■□□□□ -0
NUP98-204ENST00000397004 CNOT10Q9H9A5 744 aaKnown RBP15.03■□□□□ -0
NUP98-204ENST00000397004 NOD2Q9HC29 1040 aa15.03■□□□□ -0
NUP98-204ENST00000397004 MLXIPLQ9NP71 852 aa15.03■□□□□ -0
NUP98-204ENST00000397004 PCYOX1Q9UHG3 505 aa15.03■□□□□ -0
NUP98-204ENST00000397004 PFASO15067 1338 aa15.03■□□□□ -0
NUP98-204ENST00000397004 ASAP2O43150 1006 aa15.02■□□□□ -0
NUP98-204ENST00000397004 PHF2O75151 1096 aa15.02■□□□□ -0
NUP98-204ENST00000397004 GDF11O95390 407 aa15.02■□□□□ -0
NUP98-204ENST00000397004 GH1P01241 217 aa15.02■□□□□ -0
NUP98-204ENST00000397004 CCDC197Q8NCU1 140 aa15.02■□□□□ -0
NUP98-204ENST00000397004 TBC1D31Q96DN5 1066 aa15.02■□□□□ -0
NUP98-204ENST00000397004 FAM198AQ9UFP1 575 aa15.02■□□□□ -0
NUP98-204ENST00000397004 A8MUI8 341 aa15.02■□□□□ -0
NUP98-204ENST00000397004 PSMD10O75832 226 aa15.02■□□□□ -0
NUP98-204ENST00000397004 ELF1P32519 619 aa15.02■□□□□ -0
NUP98-204ENST00000397004 ZNF131P52739 623 aa15.02■□□□□ -0
NUP98-204ENST00000397004 LONRF1Q17RB8 773 aa15.02■□□□□ -0
NUP98-204ENST00000397004 DENND2CQ68D51 928 aa15.02■□□□□ -0
NUP98-204ENST00000397004 CCDC137Q6PK04 289 aaKnown RBP15.02■□□□□ -0
NUP98-204ENST00000397004 OTUD6AQ7L8S5 288 aa15.02■□□□□ -0
NUP98-204ENST00000397004 N4BP2L2Q92802 583 aaPredicted RBP15.02■□□□□ -0
NUP98-204ENST00000397004 STAMBPL1Q96FJ0 436 aa15.02■□□□□ -0
NUP98-204ENST00000397004 ZSWIM1Q9BR11 485 aa15.02■□□□□ -0
NUP98-204ENST00000397004 SLC26A4O43511 780 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 PPP1R12BO60237 982 aaPredicted RBP15.02□□□□□ -0.01
NUP98-204ENST00000397004 TBCAO75347 108 aaKnown RBP15.02□□□□□ -0.01
NUP98-204ENST00000397004 SGPL1O95470 568 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 SERPINB2P05120 415 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 CYP3A4P08684 503 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 CHKAP35790 457 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 CGB2Q6NT52 195 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 VSTM1Q6UX27 236 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 FAM20AQ96MK3 541 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 CCDC134Q9H6E4 229 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 ODF2LQ9ULJ1 636 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 LRRC37AA6NMS7 1700 aa15.02□□□□□ -0.01
NUP98-204ENST00000397004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 FAM187AA6NFU0 413 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 EIF3DO15371 548 aaKnown RBP eCLIP15.01□□□□□ -0.01
NUP98-204ENST00000397004 NDUFB10O96000 172 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 CETPP11597 493 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 DHX34Q14147 1143 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 PCIF1Q9H4Z3 704 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 UBOX5O94941 541 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 NEDD9Q14511 834 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 PPP1R7Q15435 360 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 NFIL3Q16649 462 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 NOP9Q86U38 636 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 SLF2Q8IX21 1173 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 MAGEC3Q8TD91 643 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 ART4Q93070 314 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 TNFAIP3P21580 790 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 HADHBP55084 474 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 MGAT5Q09328 741 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 SEPT14Q6ZU15 432 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 TBC1D1Q86TI0 1168 aaPredicted RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 CYP4X1Q8N118 509 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 ERMNQ8TAM6 284 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 TCP11Q8WWU5 503 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 NAP1L4Q99733 375 aaKnown RBP15.01□□□□□ -0.01
NUP98-204ENST00000397004 SH2D3AQ9BRG2 576 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
NUP98-204ENST00000397004 UBE2TQ9NPD8 197 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms