RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 STX2P32856 288 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 MAPK7Q13164 816 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 AUHQ13825 339 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF449Q6P9G9 518 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 TAOK1Q7L7X3 1001 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 RASGEF1CQ8N431 466 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 FITM2Q8N6M3 262 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 EIF1ADQ8N9N8 165 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 TBC1D22AQ8WUA7 517 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 RMDN2Q96LZ7 410 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 TMEM237Q96Q45 408 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 HOMER3Q9NSC5 361 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 CES2O00748 559 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 DDX3YO15523 660 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 NR3C1P04150 777 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ATP2A2P16615 1042 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ADCY2Q08462 1091 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 KNOP1Q1ED39 458 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 PRR16Q569H4 304 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ARSHQ5FYA8 562 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 TTC27Q6P3X3 843 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 CENPTQ96BT3 561 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 OSBPL1AQ9BXW6 950 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 VPS33BQ9H267 617 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF646O15015 1829 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 AGTP01019 485 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 GSTA1P08263 222 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 POU5F1Q01860 360 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 CTTNQ14247 550 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF268Q14587 947 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 EPHA7Q15375 998 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ZC2HC1CQ53FD0 456 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 CAPN12Q6ZSI9 719 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 SPATA21Q7Z572 469 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 SRRM1Q8IYB3 904 aaKnown RBP10.59□□□□□ -0.71
TRIM39-203ENST00000396547 PGM2Q96G03 612 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 FAM118BQ9BPY3 351 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 REEP2Q9BRK0 252 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 PSTPIP2Q9H939 334 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ADAM22Q9P0K1 906 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 ASIC3Q9UHC3 531 aa10.59□□□□□ -0.71
TRIM39-203ENST00000396547 RIPK2O43353 540 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 HIP1RO75146 1068 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 BRAFP15056 766 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 CCND1P24385 295 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 BTDP43251 543 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 IRX1P78414 480 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 CALCOCO2Q13137 446 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 KYNUQ16719 465 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 HP1BP3Q5SSJ5 553 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 RFFLQ8WZ73 363 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 TGS1Q96RS0 853 aaKnown RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 ZCWPW1Q9H0M4 648 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 COG5Q9UP83 839 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 FERP16591 822 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 ERFP50548 548 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 COG2Q14746 738 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 SLFN11Q7Z7L1 901 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 MAB21L3Q8N8X9 362 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 PRELID2Q8N945 189 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 PIGOQ8TEQ8 1089 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 ELMO3Q96BJ8 720 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 NAP1L3Q99457 506 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-203ENST00000396547 NT5C3AQ9H0P0 336 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 ACP6Q9NPH0 428 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 GRHL1Q9NZI5 618 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 PIM2Q9P1W9 311 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 KLHL14Q9P2G3 628 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 PCDHA2Q9Y5H9 948 aa10.58□□□□□ -0.72
TRIM39-203ENST00000396547 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SPOPO43791 374 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 CALUO43852 315 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SMIM24O75264 130 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TBCAO75347 108 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 SPAG7O75391 227 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 ZBTB48P10074 688 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 YBX3P16989 372 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TARSP26639 723 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 NMT1P30419 496 aaKnown RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 RAD23BP54727 409 aa10.57□□□□□ -0.72
TRIM39-203ENST00000396547 TBC1D10BQ4KMP7 808 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-203ENST00000396547 AP1ARQ63HQ0 302 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms