RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 COPS2P61201 443 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 PRR16Q569H4 304 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 FAM133BQ5BKY9 247 aaKnown RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 TTC27Q6P3X3 843 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 ADAT2Q7Z6V5 191 aaKnown RBP9.36□□□□□ -0.91
BDNF-204ENST00000395980 EXOC3L1Q86VI1 746 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 CNKSR1Q969H4 720 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 TBC1D31Q96DN5 1066 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 ECT2Q9H8V3 914 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 TMOD4Q9NZQ9 345 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 CTTNBP2NLQ9P2B4 639 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 FRMD4BQ9Y2L6 1034 aa9.36□□□□□ -0.91
BDNF-204ENST00000395980 ZNF335Q9H4Z2 1342 aaPredicted RBP9.35□□□□□ -0.91
BDNF-204ENST00000395980 TCEA3O75764 348 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 ANP32DO95626 131 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 MUTP22033 750 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SHMT1P34896 483 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SLC16A2P36021 539 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 GPC5P78333 572 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 NAA25Q14CX7 972 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 AGAP11Q8TF27 550 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 CD101Q93033 1021 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 TUFT1Q9NNX1 390 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 ARHGEF3Q9NR81 526 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SMIM23A6NLE4 172 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 P4HA2O15460 535 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 UFL1O94874 794 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 FGFR4P22455 802 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 ALDH5A1P51649 535 aaPredicted RBP9.35□□□□□ -0.91
BDNF-204ENST00000395980 CCNG1P51959 295 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 GPSM2P81274 684 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 CALCOCO2Q13137 446 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
BDNF-204ENST00000395980 CLEC10AQ8IUN9 316 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 DYDC1Q8WWB3 177 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 CKAP2Q8WWK9 683 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
BDNF-204ENST00000395980 MTFR1LQ9H019 292 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 RXFP1Q9HBX9 757 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 USP40Q9NVE5 1235 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 TAS2R14Q9NYV8 317 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SPATA31A5Q5VU36 1347 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SPATA31A7Q8IWB4 1347 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 CCDC189A1A4V9 331 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 KCNQ2O43526 872 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 GZMAP12544 262 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 IFNAR2P48551 515 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
BDNF-204ENST00000395980 KCTD1Q719H9 257 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 GRAMD1AQ96CP6 724 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 LRRC19Q9H756 370 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 PARVGQ9HBI0 331 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 KCND2Q9NZV8 630 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
BDNF-204ENST00000395980 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
BDNF-204ENST00000395980 CYP3A4P08684 503 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 KCNA1Q09470 495 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 ASRGL1Q7L266 308 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 KRT35Q92764 455 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 MKL1Q969V6 931 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 KLHL29Q96CT2 875 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 EIF2AK1Q9BQI3 630 aaKnown RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 ECEL1O95672 775 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 CCNB1P14635 433 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 MAN1A1P33908 653 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 KCNJ2P63252 427 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 ACVR2BQ13705 512 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 SIX1Q15475 284 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 C1orf186Q6ZWK4 172 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 PALB2Q86YC2 1186 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 CCDC105Q8IYK2 499 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 ZDHHC14Q8IZN3 488 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 CCDC24Q8N4L8 307 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 AGPAT3Q9NRZ7 376 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 FGFR1OP2Q9NVK5 253 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 TMEM120BA0PK00 339 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 TCP11X1B4DZS4 312 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 MSH4O15457 936 aa9.34□□□□□ -0.91
BDNF-204ENST00000395980 FTLP02792 175 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 RPSAP08865 295 aaKnown RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 IRX1P78414 480 aaPredicted RBP9.34□□□□□ -0.91
BDNF-204ENST00000395980 CAV1Q03135 178 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms