RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TBC1D8BQ0IIM8 1120 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 KCNMA1Q12791 1236 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 HSP90AA4PQ58FG1 418 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 HGSNATQ68CP4 663 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CEP57Q86XR8 500 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 MAP4K3Q8IVH8 894 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ACRBPQ8NEB7 543 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 LMO3Q8TAP4 145 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ADAMTS19Q8TE59 1207 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 MFSD14AQ96MC6 490 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 MMS19Q96T76 1030 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 KATNBL1Q9H079 304 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NDST4Q9H3R1 872 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 HAUS4Q9H6D7 363 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 SIX2Q9NPC8 291 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ARHGAP28Q9P2N2 729 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 Q9Y3F1 56 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 SAMM50Q9Y512 469 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 SYNGAP1Q96PV0 1343 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 SRRM3A6NNA2 597 aaPredicted RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 GPR37O15354 613 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 KIAA0754O94854 1291 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 TNFRSF8P28908 595 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 HOXC8P31273 242 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 AFMP43652 599 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 ASIC1P78348 528 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 MTMR2Q13614 643 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 ANGEL2Q5VTE6 544 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 C6orf89Q6UWU4 347 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 RNF207Q6ZRF8 634 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 MICALCLQ6ZW33 695 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 FAM228AQ86W67 206 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 CSGALNACT2Q8N6G5 542 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 SLC30A5Q8TAD4 765 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 PMM1Q92871 262 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 NUP88Q99567 741 aaPredicted RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 ZNF577Q9BSK1 485 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 TRIM6Q9C030 488 aaPredicted RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 DHX33Q9H6R0 707 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 PARVGQ9HBI0 331 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 KIAA1586Q9HCI6 787 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 DDX20Q9UHI6 824 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 NDUFAB1O14561 156 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 ARL2P36404 184 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 RPS6P62753 249 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 VGLL4Q14135 290 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 R3HDM1Q15032 1099 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 CCDC40Q4G0X9 1142 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 PRR16Q569H4 304 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 TTMPQ5BVD1 217 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 PDXDC1Q6P996 788 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 CCDC62Q6P9F0 684 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 PPFIBP1Q86W92 1011 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 GPBP1Q86WP2 473 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 CCDC13Q8IYE1 715 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 TAF4BQ92750 862 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 WRAP73Q9P2S5 460 aaPredicted RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 RNF14Q9UBS8 474 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 KIAA1024Q9UPX6 916 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
VPS41-203ENST00000395969 PATJQ8NI35 1801 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 NCANO14594 1321 aa5.82□□□□□ -1.48
VPS41-203ENST00000395969 POTEB3A0JP26 581 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 FAM196BA6NMK8 535 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 NFIBO00712 420 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 STAU1O95793 577 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 ARP10275 920 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 FCER1AP12319 257 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CASP14P31944 242 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 GCLCP48506 637 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 FXR1P51114 621 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS41-203ENST00000395969 KRT83P78385 493 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SPP2Q13103 211 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 KIF22Q14807 665 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 NAA35Q5VZE5 725 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 PPP1R2P3Q6NXS1 205 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 POTEBQ6S5H4 581 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 DNAJC14Q6Y2X3 702 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 SLFN11Q7Z7L1 901 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CCDC50Q8IVM0 306 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 MAB21L3Q8N8X9 362 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 MCPH1Q8NEM0 835 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 TATDN2Q93075 761 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 PBXIP1Q96AQ6 731 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CDK5RAP3Q96JB5 506 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SYT17Q9BSW7 474 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CCDC113Q9H0I3 377 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 EPN3Q9H201 632 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 BLZF1Q9H2G9 400 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 ATP6V0A4Q9HBG4 840 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 SLC40A1Q9NP59 571 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 TTC7AQ9ULT0 858 aaPredicted RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 EIF4E1BA6NMX2 242 aaKnown RBP5.81□□□□□ -1.48
VPS41-203ENST00000395969 NKRFO15226 690 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS41-203ENST00000395969 OPA1O60313 960 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 GAS7O60861 476 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 DGAT1O75907 488 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 CCNE2O96020 404 aa5.81□□□□□ -1.48
VPS41-203ENST00000395969 RPSAP08865 295 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms