RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 LACRTQ9GZZ8 138 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 PHF24Q9UPV7 400 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 TNKSO95271 1327 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 SERPINB8P50452 374 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 C6orf183Q5T699 404 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 VPS36Q86VN1 386 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 CNGB3Q9NQW8 809 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 TRAF3IP3Q9Y228 551 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 ITIH6Q6UXX5 1313 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 CDC27P30260 824 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 EIF2B2P49770 351 aaKnown RBP12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 MED21Q13503 144 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 C6orf118Q5T5N4 469 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 ETNK2Q9NVF9 386 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 HAO1Q9UJM8 370 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 MTUS1Q9ULD2 1270 aa12.14□□□□□ -0.47
RAPGEF3-202ENST00000395358 ARHGAP42A6NI28 874 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 E7ENQ6 273 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 ASAP2O43150 1006 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 IQCKQ8N0W5 287 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 MAML3Q96JK9 1138 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CARD8Q9Y2G2 431 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 DAPK3O43293 454 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 EIF4A3P38919 411 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 ABCB5Q2M3G0 1257 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 FAM170AA1A519 330 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 NOL3O60936 208 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CYP2D6P10635 497 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 FUT4P22083 530 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CDK8P49336 464 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CCR3P51677 355 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 ITIH3Q06033 890 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 CDC42EP5Q6NZY7 148 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 MRRFQ96E11 262 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 TGS1Q96RS0 853 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 PARVBQ9HBI1 364 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 NDE1Q9NXR1 346 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 LNPEPQ9UIQ6 1025 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
RAPGEF3-202ENST00000395358 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 SHBGP04278 402 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 MARK3P27448 753 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 TMEM53Q6P2H8 277 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 PEX26Q7Z412 305 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 PATL1Q86TB9 770 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 DIS3L2Q8IYB7 885 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ZSWIM5Q9P217 1185 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 RAD51CO43502 376 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 KIF11P52732 1056 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 IL9RQ01113 521 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 RAPGEF1Q13905 1077 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 CNPY1Q3B7I2 92 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 RILPL1Q5EBL4 403 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 RESP18Q5W5W9 173 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ARPC5LQ9BPX5 153 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 PACSIN2Q9UNF0 486 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 CSADQ9Y600 493 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 DCTN3O75935 186 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ITGA2BP08514 1039 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 MYBPC2Q14324 1141 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 CCT7Q99832 543 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 CORO1BQ9BR76 489 aa12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-202ENST00000395358 VAV1P15498 845 aa12.11□□□□□ -0.47
RAPGEF3-202ENST00000395358 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
RAPGEF3-202ENST00000395358 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms