RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 C11orf88Q6PI97 169 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 TPTE2Q6XPS3 522 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 CREG2Q8IUH2 290 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ZDHHC17Q8IUH5 632 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 DEPTORQ8TB45 409 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 MAML3Q96JK9 1138 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 SLC4A9Q96Q91 983 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 YME1L1Q96TA2 773 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 ANO10Q9NW15 660 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 COQ3Q9NZJ6 369 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 PHF24Q9UPV7 400 aa4.61□□□□□ -1.67
HERC4-204ENST00000395198 A0A087WV62 115 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CTAGE9A4FU28 777 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DCDC2CA8MYV0 355 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 NDUFAB1O14561 156 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 MAGEB3O15480 346 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ALOX12P18054 663 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ATP5JP18859 108 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PRIM2P49643 509 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 NRG1Q02297 640 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 PCSK7Q16549 785 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZNF827Q17R98 1081 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 TMEM67Q5HYA8 995 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 C1orf185Q5T7R7 199 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CREB3L3Q68CJ9 461 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 HAUS3Q68CZ6 603 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 NAA16Q6N069 864 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 TMC6Q7Z403 805 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 NKAIN4Q8IVV8 208 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DNAJB8Q8NHS0 232 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CDKL2Q92772 493 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CNKSR1Q969H4 720 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 MTFR1LQ9H019 292 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PARVGQ9HBI0 331 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZNF536O15090 1300 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 KRT87PA6NCN2 255 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 B4DLN1 442 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 AP3D1O14617 1153 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 YEATS4O95619 227 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 RFC4P35249 363 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 SCNN1BP51168 640 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 BASP1P80723 227 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 LIPEQ05469 1076 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 NOLC1Q14978 699 aaKnown RBP eCLIP4.6□□□□□ -1.67
HERC4-204ENST00000395198 SURF1Q15526 300 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 SKOR2Q2VWA4 1001 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 CYP4A22Q5TCH4 519 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZNF783Q6ZMS7 281 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CPOQ8IVL8 374 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 FAM71DQ8N9W8 422 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DHX58Q96C10 678 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 TRERF1Q96PN7 1200 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 FAM193BQ96PV7 902 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZBTB3Q9H5J0 574 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 SH2B1Q9NRF2 756 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 FKBP14Q9NWM8 211 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 EHD3Q9NZN3 535 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 AP1M2Q9Y6Q5 423 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DHX29Q7Z478 1369 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 GLI2P10070 1586 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 GOLGA6L7A0A1B0GV03 622 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 RSPH10B2B2RC85 870 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 TSPAN3O60637 253 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 WEE2P0C1S8 567 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 RSPH10BP0C881 870 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PMS1P54277 932 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 ACTN3Q08043 901 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 FBXO43Q4G163 708 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 HSP90AA4PQ58FG1 418 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DCAF17Q5H9S7 520 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 MRPL10Q7Z7H8 261 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 WDR63Q8IWG1 891 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PPP1R35Q8TAP8 253 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZNF507Q8TCN5 953 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 SH3RF3Q8TEJ3 882 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 CASP10Q92851 521 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 USP13Q92995 863 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 OSBP2Q969R2 916 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CABS1Q96KC9 395 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 EXOC2Q96KP1 924 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CITED4Q96RK1 184 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 STRA6Q9BX79 667 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 TRIM5Q9C035 493 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 RHBGQ9H310 441 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 C8orf33Q9H7E9 229 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 POLKQ9UBT6 870 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 MROH5Q6ZUA9 1318 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 KERAO60938 352 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 IDH1O75874 414 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 PRKD3O94806 890 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 PDIA3P30101 505 aaKnown RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 CCNFP41002 786 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 DR1Q01658 176 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ARL13BQ3SXY8 428 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 CYP27C1Q4G0S4 372 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 IFFO2Q5TF58 517 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 TMEM53Q6P2H8 277 aa4.6□□□□□ -1.67
HERC4-204ENST00000395198 ZNF574Q6ZN55 896 aaPredicted RBP4.6□□□□□ -1.67
HERC4-204ENST00000395198 KRT73Q86Y46 540 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms