RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TAS1R2Q8TE23 839 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 EMC2Q15006 297 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 VSIG10LQ86VR7 867 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 RBM12Q9NTZ6 932 aaKnown RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 ODF2LQ9ULJ1 636 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 GSTTP1A0A1W2PQM5 241 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 GOLGA6L10A6NI86 522 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 CAPN2P17655 700 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 DDX42Q86XP3 938 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 BAP1Q92560 729 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 AJAP1Q9UKB5 411 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 TBX20Q9UMR3 447 aa17.18■□□□□ 0.34
SMARCD1-202ENST00000394963 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 HOXD13P35453 343 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 SOX5P35711 763 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 CPA5Q8WXQ8 436 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 SEL1LQ9UBV2 794 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 APEX2Q9UBZ4 518 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 DMGDHQ9UI17 866 aaKnown RBP17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 NAGPAQ9UK23 515 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 UBR3Q6ZT12 1888 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 THSD7AQ9UPZ6 1657 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 FGGP02679 453 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 CTNNA2P26232 953 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 TAS2R14Q9NYV8 317 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 SNX12Q9UMY4 172 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ZNF862O60290 1169 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 USP2O75604 605 aaPredicted RBP17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ATP1A2P50993 1020 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ARHGEF19Q8IW93 802 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 TATDN2Q93075 761 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ZNF446Q9NWS9 450 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 AGO2Q9UKV8 859 aaKnown RBP17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
SMARCD1-202ENST00000394963 NOL4O94818 638 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 CASP8Q14790 479 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 HEMGNQ9BXL5 484 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 THAP2Q9H0W7 228 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 RBAKQ9NYW8 714 aaPredicted RBP17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 THAP12O43422 761 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 SGPL1O95470 568 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 TNNC1P63316 161 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 CAPN12Q6ZSI9 719 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 ANKRD13AQ8IZ07 590 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 NLRP7Q8WX94 980 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 TRAF3IP3Q9Y228 551 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 MYH10P35580 1976 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 OSBPP22059 807 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 MFAP3P55082 362 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 BRDTQ58F21 947 aaPredicted RBP17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 DAW1Q8N136 415 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 RBM46Q8TBY0 533 aaKnown RBP17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 C11orf70Q9BRQ4 267 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 PDGFCQ9NRA1 345 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 KLHL11Q9NVR0 708 aa17.16■□□□□ 0.34
SMARCD1-202ENST00000394963 FAM160B1Q5W0V3 765 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 CCDC105Q8IYK2 499 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 TRIM6Q9C030 488 aaPredicted RBP17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 HSF2BPO75031 334 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 DGAT1O75907 488 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 HSD17B4P51659 736 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 XKR3Q5GH77 459 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 DCUN1D2Q6PH85 259 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 GSTA5Q7RTV2 222 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 SLC47A2Q86VL8 602 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 AMACRQ9UHK6 382 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 ZNF214Q9UL59 606 aaPredicted RBP17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 UBIAD1Q9Y5Z9 338 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 DAB2IPQ5VWQ8 1189 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 KRT39Q6A163 491 aa17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 PRPF31Q8WWY3 499 aaKnown RBP17.15■□□□□ 0.34
SMARCD1-202ENST00000394963 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms