RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CLCN3P51790 818 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 VAMP7P51809 220 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
TDP1-203ENST00000393454 SLC39A4Q6P5W5 647 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 GPIHBP1Q8IV16 184 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
TDP1-203ENST00000393454 ZNF668Q96K58 619 aaPredicted RBP9.42□□□□□ -0.9
TDP1-203ENST00000393454 C16orf70Q9BSU1 422 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 KCND1Q9NSA2 647 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 GCNT4Q9P109 453 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 CEP72Q9P209 647 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 MGAMO43451 1857 aa9.42□□□□□ -0.9
TDP1-203ENST00000393454 IGKV6-21A0A0C4DH24 114 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 NOL4O94818 638 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TBC1D8O95759 1140 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GJB1P08034 283 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 CCDC175P0C221 793 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GARTP22102 1010 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 FECHP22830 423 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 KLRC1P26715 233 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 PON1P27169 355 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 DLG4P78352 724 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 MYL7Q01449 175 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 PPFIA1Q13136 1202 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TFDP1Q14186 410 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 PDXDC1Q6P996 788 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TLK2Q86UE8 772 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 CBWD2Q8IUF1 395 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GPD1LQ8N335 351 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TMEM174Q8WUU8 243 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 CCDC127Q96BQ5 260 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 NLRP4Q96MN2 994 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TARS2Q9BW92 718 aaKnown RBP9.41□□□□□ -0.9
TDP1-203ENST00000393454 AP5M1Q9H0R1 490 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 KAT6AQ92794 2004 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 MAPK13O15264 365 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 MAGEB2O15479 319 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 C22orf31O95567 290 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 ADRB2P07550 413 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GCLMP48507 274 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 EFNA5P52803 228 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
TDP1-203ENST00000393454 CETN1Q12798 172 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 RAPGEF1Q13905 1077 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 ZBTB45Q96K62 511 aaPredicted RBP9.41□□□□□ -0.9
TDP1-203ENST00000393454 PPP1R16BQ96T49 567 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 FAM213AQ9BRX8 229 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 ANKFY1Q9P2R3 1169 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GNEQ9Y223 722 aaKnown RBP9.41□□□□□ -0.9
TDP1-203ENST00000393454 AKT3Q9Y243 479 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 EPN1Q9Y6I3 576 aaPredicted RBP9.41□□□□□ -0.9
TDP1-203ENST00000393454 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
TDP1-203ENST00000393454 GTPBP10A4D1E9 387 aaKnown RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 PRKCBP05771 671 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 COL1A2P08123 1366 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 MYL3P08590 195 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 HARSP12081 509 aaKnown RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 TMOD1P28289 359 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 CYLC1P35663 651 aaPredicted RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 IRF5Q13568 498 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 KIF22Q14807 665 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 GRIK4Q16099 956 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 MEA1Q16626 185 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 KLHDC7AQ5VTJ3 777 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 MFSD14CQ5VZR4 134 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 SLFN12LQ6IEE8 588 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 ACRBPQ8NEB7 543 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 BAP1Q92560 729 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 SPAG5Q96R06 1193 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 MSTO1Q9BUK6 570 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 GANQ9H2C0 597 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 NHEJ1Q9H9Q4 299 aaPredicted RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 PLCB1Q9NQ66 1216 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 AGO2Q9UKV8 859 aaKnown RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 GABRQQ9UN88 632 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
TDP1-203ENST00000393454 R3HCC1Q9Y3T6 440 aaKnown RBP9.4□□□□□ -0.9
TDP1-203ENST00000393454 ZSWIM8A7E2V4 1837 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 A6NJR5 290 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 ZNF233A6NK53 670 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 INO80B-WBP1J3KQ70 363 aa9.4□□□□□ -0.91
TDP1-203ENST00000393454 ASAP2O43150 1006 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms