RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM160B1Q5W0V3 765 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 SLC9A9Q8IVB4 645 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 KAT5Q92993 513 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 IFT74Q96LB3 600 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 TARS2Q9BW92 718 aaKnown RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 NRBP2Q9NSY0 501 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 MYH9P35579 1960 aaKnown RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 SMPD1P17405 629 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 ACOT2P49753 483 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 CLCN3P51790 818 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 GRB14Q14449 540 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 PHLDB3Q6NSJ2 640 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 KRT222Q8N1A0 295 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 UNCXA6NJT0 531 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 CCP110O43303 1012 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 DEF6Q9H4E7 631 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 HAUS4Q9H6D7 363 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ARID2Q68CP9 1835 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 MACROD2A1Z1Q3 448 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ENC1O14682 589 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 LGR5O75473 907 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 DLATP10515 647 aaKnown RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 CTGFP29279 349 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 MYL7Q01449 175 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 IRF2BP2Q7Z5L9 587 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 LMO3Q8TAP4 145 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 INTS2Q9H0H0 1204 aaKnown RBP16.29■□□□□ 0.2
MKS1-202ENST00000393119 ANKFY1Q9P2R3 1169 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
MKS1-202ENST00000393119 AKR1B10O60218 316 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 CASQ1P31415 396 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 CYP2C19P33261 490 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 NLRP11P59045 1033 aaKnown RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 ALCAMQ13740 583 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 DEPTORQ8TB45 409 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
MKS1-202ENST00000393119 PACSIN1Q9BY11 444 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 TMEM117Q9H0C3 514 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 DIS3Q9Y2L1 958 aaKnown RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 A0A087X0T9 212 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 GFPT2O94808 682 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 FAM228BP0C875 321 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 PTK2Q05397 1052 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 RGMBQ6NW40 437 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 RHPN2Q8IUC4 686 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
MKS1-202ENST00000393119 TINF2Q9BSI4 451 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 ACP6Q9NPH0 428 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 DNAJC12Q9UKB3 198 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 PCDHA13Q9Y5I0 950 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
MKS1-202ENST00000393119 K7ERI5 159 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 STRNO43815 780 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 LGALS2P05162 132 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 KRT13P13646 458 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 CYP2B6P20813 491 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
MKS1-202ENST00000393119 LIG4P49917 911 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.2
MKS1-202ENST00000393119 CALCAP01258 141 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 INSRRP14616 1297 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 LAMTOR4Q0VGL1 99 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 ZBTB33Q86T24 672 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms