RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 UBXN11Q5T124 520 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 SYT2Q8N9I0 419 aaPredicted RBP14□□□□□ -0.17
GGPS1-203ENST00000391855 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 COLGALT1Q8NBJ5 622 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 URGCPQ8TCY9 931 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 ZNF558Q96NG5 402 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 TRIM6Q9C030 488 aaPredicted RBP14□□□□□ -0.17
GGPS1-203ENST00000391855 CCSER1Q9C0I3 900 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 FZD8Q9H461 694 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 CWH43Q9H720 699 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 RSAD1Q9HA92 442 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 PLAGL2Q9UPG8 496 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 PRRC2BQ5JSZ5 2229 aaKnown RBP14□□□□□ -0.17
GGPS1-203ENST00000391855 N4BP3O15049 544 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 GRM6O15303 877 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 NCK2O43639 380 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 ARF4P18085 180 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-203ENST00000391855 TXLNAP40222 546 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 DMP1Q13316 513 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-203ENST00000391855 NOMO2Q5JPE7 1267 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 SLC27A1Q6PCB7 646 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 C1orf186Q6ZWK4 172 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 BSNDQ8WZ55 320 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-203ENST00000391855 KANSL3Q9P2N6 904 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 SRPRBQ9Y5M8 271 aaKnown RBP13.99□□□□□ -0.17
GGPS1-203ENST00000391855 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
GGPS1-203ENST00000391855 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ACKR2O00590 384 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 HIP1RO75146 1068 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SSBP05455 408 aaKnown RBP eCLIP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ITGB1P05556 798 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PRKCBP05771 671 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PLA2G4BP0C869 781 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ITGA4P13612 1032 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PLCB3Q01970 1234 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PRPF4BQ13523 1007 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PDE12Q6L8Q7 609 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 KCNT2Q6UVM3 1135 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 LPPQ93052 612 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 HLA-CQ95604 372 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 USP28Q96RU2 1077 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 RUSC1Q9BVN2 902 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 CCDC113Q9H0I3 377 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 CCDC39Q9UFE4 941 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 IPPQ9Y573 584 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 CDH23Q9H251 3354 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 FSD2A1L4K1 749 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 INPPL1O15357 1258 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 OFD1O75665 1012 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 FGF18O76093 207 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ZSCAN22P10073 491 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SCP2P22307 547 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SLC12A3P55017 1021 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 MRPS5P82675 430 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SLC39A14Q15043 492 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 TJAP1Q5JTD0 557 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 AGMOQ6ZNB7 445 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 LRRC55Q6ZSA7 311 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SMG8Q8ND04 991 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 POF1BQ8WVV4 589 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 CPB2Q96IY4 423 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ADPGKQ9BRR6 497 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 TMEM134Q9H6X4 195 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
GGPS1-203ENST00000391855 TBC1D13Q9NVG8 400 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 ODF2LQ9ULJ1 636 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
GGPS1-203ENST00000391855 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 CCDC169A6NNP5 214 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 H0YCG3 227 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 B4GALT5O43286 388 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 PLCG1P19174 1290 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 NPTX2P47972 431 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 SMTNP53814 917 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 KRT17Q04695 432 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 RNASELQ05823 741 aaKnown RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 MAPK7Q13164 816 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 STK38Q15208 465 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 DCAF4L1Q3SXM0 396 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms