RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CYP2D7A0A087X1C5 515 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 NBNO60934 754 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 TCN1P20061 433 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 ARSEP51690 589 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 CEP78Q5JTW2 689 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 INTS2Q9H0H0 1204 aaKnown RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 CPA2P48052 419 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ICA1Q05084 483 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 FMR1Q06787 632 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 INPP5AQ14642 412 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ACAP3Q96P50 834 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ZFATQ9P243 1243 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 SNX2O60749 519 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 TRIM16LQ309B1 348 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 CCDC103Q8IW40 242 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 SIX6OS1Q8N1H7 587 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 OR9Q1Q8NGQ5 310 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 NR1H4Q96RI1 486 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 PPP6R3Q5H9R7 873 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 USP17L2Q6R6M4 530 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 DDIASQ8IXT1 998 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 CASP10Q92851 521 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 NMD3Q96D46 503 aaKnown RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 NR3C1P04150 777 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ENO3P13929 434 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 PACS2Q86VP3 889 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 APLFQ8IW19 511 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 EXOC8Q8IYI6 725 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 NOA1Q8NC60 698 aaKnown RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 DDHD1Q8NEL9 900 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 TBC1D4O60343 1298 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 SNAP25P60880 206 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ROR1Q01973 937 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 SH3GL1Q99961 368 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 CCDC134Q9H6E4 229 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 FBXO2Q9UK22 296 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-204ENST00000391814 ITM2BQ9Y287 266 aa17.13■□□□□ 0.33
SHANK1-204ENST00000391814 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 PHF2O75151 1096 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 RSPH10BP0C881 870 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 C16orf89Q6UX73 402 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 CDHR2Q9BYE9 1310 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-204ENST00000391814 ACADSP16219 412 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 NYAP1Q6ZVC0 841 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 SNX19Q92543 992 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-204ENST00000391814 PROM2Q8N271 834 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 B2RBV5 119 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-204ENST00000391814 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-204ENST00000391814 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
SHANK1-204ENST00000391814 ZFYVE19Q96K21 471 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 KIAA0825Q8IV33 1275 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 HACE1Q8IYU2 909 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 LRRC34Q8IZ02 419 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 HIC2Q96JB3 615 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 KIF2CQ99661 725 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 COQ7Q99807 217 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 C10orf88Q9H8K7 445 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 KLHL11Q9NVR0 708 aa17.12■□□□□ 0.33
SHANK1-204ENST00000391814 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SFR1Q86XK3 245 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 NSL1Q96IY1 281 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 KLHL25Q9H0H3 589 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SLC13A4Q9UKG4 626 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 C1orf228Q6PIY5 440 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 H3BQF6 201 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 PIK3R2O00459 728 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SOX11P35716 441 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 DMC1Q14565 340 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SPICE1Q8N0Z3 855 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 B4GALNT2Q8NHY0 566 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
SHANK1-204ENST00000391814 NUP93Q8N1F7 819 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 MTBPQ96DY7 904 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 CNGB3Q9NQW8 809 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms