RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 MKS1Q9NXB0 559 aa4.17□□□□□ -1.74
RNU6-550P-201ENST00000391057 ING3Q9NXR8 418 aa4.17□□□□□ -1.74
RNU6-550P-201ENST00000391057 NCDNQ9UBB6 729 aa4.17□□□□□ -1.74
RNU6-550P-201ENST00000391057 ZBTB21Q9ULJ3 1066 aa4.17□□□□□ -1.74
RNU6-550P-201ENST00000391057 SLC30A1Q9Y6M5 507 aa4.17□□□□□ -1.74
RNU6-550P-201ENST00000391057 TRIM75PA6NK02 468 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 PATE3B3GLJ2 98 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 OSMP13725 252 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 MSX2P35548 267 aaPredicted RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 MTNR1BP49286 362 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 NPEPPSP55786 919 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 WNT3AP56704 352 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 ICAM4Q14773 271 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 GRM7Q14831 915 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 SPATS1Q496A3 300 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 HS1BP3Q53T59 392 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 PGM2L1Q6PCE3 622 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 BTNL9Q6UXG8 535 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 KCNK18Q7Z418 384 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 POLNQ7Z5Q5 900 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 ADGRE4PQ86SQ3 457 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 RPUSD2Q8IZ73 545 aaKnown RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 MSL3Q8N5Y2 521 aaKnown RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 C1orf162Q8NEQ5 155 aaPredicted RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 ARL8AQ96BM9 186 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 TMEM176AQ96HP8 235 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 SMAD5Q99717 465 aaKnown RBP4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 SMPD4Q9NXE4 827 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 PLA2G3Q9NZ20 509 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 ST6GALNAC2Q9UJ37 374 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 TCAF1Q9Y4C2 921 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 GPR45Q9Y5Y3 372 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 WASHC2CQ9Y4E1 1318 aa4.16□□□□□ -1.74
RNU6-550P-201ENST00000391057 SHTN1A0MZ66 631 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 UBE2QL1A1L167 161 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 B8ZZF3 427 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 GABRDO14764 452 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF623O75123 536 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 TMEM127O75204 238 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 AGXTP21549 392 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 DUSP2Q05923 314 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 EFEMP1Q12805 493 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 ACAP2Q15057 778 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 UBE3CQ15386 1083 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADRM1Q16186 407 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 ANO4Q32M45 955 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 INAVAQ3KP66 663 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 BRDTQ58F21 947 aaPredicted RBP4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 MBNL2Q5VZF2 373 aaKnown RBP4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAM180AQ6UWF9 173 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 CMTM4Q8IZR5 234 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 GLB1L3Q8NCI6 653 aaPredicted RBP4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 DNERQ8NFT8 737 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 Q8TCH9 128 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 SNX33Q8WV41 574 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 SSH1Q8WYL5 1049 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 FATE1Q969F0 183 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 C8orf49Q96NF6 230 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 TCF25Q9BQ70 676 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADI1Q9BV57 179 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 DEF6Q9H4E7 631 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 AGO3Q9H9G7 860 aaKnown RBP4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 TLR9Q9NR96 1032 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 MRFAP1Q9Y605 127 aa4.15□□□□□ -1.75
RNU6-550P-201ENST00000391057 XPOTO43592 962 aaKnown RBP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 PHF2O75151 1096 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 GYPEP15421 78 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 COMTP21964 271 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 CTSSP25774 331 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 MAGEA10P43363 369 aaPredicted RBP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 SELENOPP49908 381 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 HHEXQ03014 270 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 FOXL1Q12952 345 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 C19orf54Q5BKX5 351 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 MUM1L1Q5H9M0 696 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 GJC2Q5T442 439 aaPredicted RBP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF585AQ6P3V2 769 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAM111BQ6SJ93 734 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 ABHD15Q6UXT9 468 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 D2HGDHQ8N465 521 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 OR5M3Q8NGP4 307 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF480Q8WV37 535 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 FUBP3Q96I24 572 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAXDC2Q96IV6 333 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 MPHOSPH9Q99550 1183 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 ASPSCR1Q9BZE9 553 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 GREM2Q9H772 168 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 CD248Q9HCU0 757 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF277Q9NRM2 450 aaPredicted RBP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 TYW1Q9NV66 732 aaKnown RBP4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 RPTORQ8N122 1335 aa4.14□□□□□ -1.75
RNU6-550P-201ENST00000391057 KLHL33A6NCF5 533 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 CAPN14A8MX76 684 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 AKR1B10O60218 316 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 RBP3P10745 1247 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 CCND1P24385 295 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 CASRP41180 1078 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 EXOSC10Q01780 885 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms