RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SLC2A4RGQ9NR83 387 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 THG1LQ9NWX6 298 aaKnown RBP1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 TMEM260Q9NX78 707 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 CEP72Q9P209 647 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 USP18Q9UMW8 372 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 SORCS3Q9UPU3 1222 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 PLAAQ9Y263 795 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 NOC2LQ9Y3T9 749 aaKnown RBP1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 XDHP47989 1333 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 MYPNQ86TC9 1320 aa1.9□□□□□ -2.11
SNORD28B-201ENST00000390993 RNASET2O00584 256 aaKnown RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 HOXA3O43365 443 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 B3GALT2O43825 422 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 PRAMEF4O60810 478 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 DNAJC6O75061 913 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 FAM20BO75063 409 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 CDC45O75419 566 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 CLSTN1O94985 981 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 GCP02774 474 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 GAAP10253 952 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 RBP3P10745 1247 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 ATP2A2P16615 1042 aaKnown RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 CPEP16870 476 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 PTX3P26022 381 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 GZMKP49863 264 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SCNN1GP51170 649 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 ANTXR2P58335 489 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 PHC1P78364 1004 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 BLOC1S1P78537 153 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 MEF2AQ02078 507 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SQSTM1Q13501 440 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 TOB2Q14106 344 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SAFB2Q14151 953 aaKnown RBP eCLIP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 MYBPC3Q14896 1274 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SPDYE7PQ495Y7 208 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 PLEKHG4Q58EX7 1191 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SPTY2D1Q68D10 685 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 NAIF1Q69YI7 327 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 FSTL4Q6MZW2 842 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 ARMC6Q6NXE6 501 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 FRMD7Q6ZUT3 714 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 KANSL1Q7Z3B3 1105 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 LRRTM3Q86VH5 581 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 NIM1KQ8IY84 436 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 BCL6BQ8N143 479 aaPredicted RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 ZNF610Q8N9Z0 462 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 CHTF18Q8WVB6 975 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 GAB3Q8WWW8 586 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 RTF1Q92541 710 aaKnown RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 LARP4BQ92615 738 aaKnown RBP1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 NELL1Q92832 810 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 NINJ1Q92982 152 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 USP7Q93009 1102 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 CLUHP3Q96NS8 147 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SLC46A2Q9BY10 475 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 HAPLN2Q9GZV7 340 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 IKZF4Q9H2S9 585 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 SPON1Q9HCB6 807 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 POGKQ9P215 609 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 ZNHIT2Q9UHR6 403 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 MSRAQ9UJ68 235 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 FZD1Q9UP38 647 aa1.89□□□□□ -2.11
SNORD28B-201ENST00000390993 GAGE12BA1L429 117 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 GAGE12HA6NDE8 117 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 B5MCH6 92 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 DVL2O14641 736 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 PPP1R12AO14974 1030 aaPredicted RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 PLSCR1O15162 318 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 FOXN1O15353 648 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 PHF2O75151 1096 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 ULK1O75385 1050 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 NUDT3O95989 172 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 LTA4HP09960 611 aaKnown RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 HK1P19367 917 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 SDSP20132 328 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 POU3F2P20265 443 aaPredicted RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 BMP5P22003 454 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 LSSP48449 732 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 NANOS3P60323 173 aaKnown RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 APBA1Q02410 837 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 PPARAQ07869 468 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 MGAT5Q09328 741 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 ACAP1Q15027 740 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 VPS72Q15906 364 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 CCDC144BQ3MJ40 725 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 ESRP1Q6NXG1 681 aaKnown RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 DPY19L2P1Q6NXN4 242 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 EFCAB12Q6NXP0 572 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 LRRC55Q6ZSA7 311 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 HTR3DQ70Z44 454 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 DOK3Q7L591 496 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 TAS1R1Q7RTX1 841 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 PLXDC1Q8IUK5 500 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 OR14C36Q8NHC7 312 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 ZFP28Q8NHY6 868 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 SLC9A6Q92581 669 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 CAVIN3Q969G5 261 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 MFSD3Q96ES6 412 aa1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 GPR101Q96P66 508 aaPredicted RBP1.88□□□□□ -2.11
SNORD28B-201ENST00000390993 NDC1Q9BTX1 674 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms