RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ZNF484Q5JVG2 852 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 CBWD2Q8IUF1 395 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 C12orf56Q8IXR9 622 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 POMGNT1Q8WZA1 660 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 ZBTB45Q96K62 511 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 NUP58Q9BVL2 599 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 ADCY3O60266 1144 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 STX10O60499 249 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 NOL4O94818 638 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 UQCRHP07919 91 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 ACTN1P12814 892 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 SLC9A1P19634 815 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 VEGFBP49765 207 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 LIG4P49917 911 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 SP3Q02447 781 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 PLEKHO2Q8TD55 490 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 TCP11Q8WWU5 503 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 C16orf45Q96MC5 204 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 NLRP4Q96MN2 994 aa13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 TARS2Q9BW92 718 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-203ENST00000389980 H0YCG3 227 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 BFSP1Q12934 665 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 GRIK4Q16099 956 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 NEK11Q8NG66 645 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 OR8K1Q8NGG5 319 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 KAT2BQ92831 832 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CHP1Q99653 195 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 DESI2Q9BSY9 194 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 HAPLN2Q9GZV7 340 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 SETD4Q9NVD3 440 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 ARHGAP6O43182 974 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CSDE1O75534 798 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 VTNP04004 478 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 SNRPFP62306 86 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 MXD4Q14582 209 aaPredicted RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 WDR59Q6PJI9 974 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 EXOC8Q8IYI6 725 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CCDC51Q96ER9 411 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
SPTBN1-203ENST00000389980 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 MYL3P08590 195 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 ELNP15502 786 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 PON1P27169 355 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 FMO5P49326 533 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 VAMP7P51809 220 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 ZBED6P86452 979 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 IRF5Q13568 498 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 EXOC3L4Q17RC7 722 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 KIAA0753Q2KHM9 967 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 TMEM174Q8WUU8 243 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 AP5M1Q9H0R1 490 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 ANKFY1Q9P2R3 1169 aa13.29□□□□□ -0.28
SPTBN1-203ENST00000389980 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 A0A1W2PQJ5 194 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CYBAP13498 195 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 KRT13P13646 458 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 AKR1A1P14550 325 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 DMTNQ08495 405 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CDCA2Q69YH5 1023 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 INTS8Q75QN2 995 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 RRAGAQ7L523 313 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 BAP1Q92560 729 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 FAM84AQ96KN4 292 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 POP1Q99575 1024 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CCDC113Q9H0I3 377 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 TMEM134Q9H6X4 195 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 MINDY3Q9H8M7 445 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 GCNT4Q9P109 453 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 LRRC53A6NM62 1247 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms