RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ARHGEF10LQ9HCE6 1279 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 PKD2L1Q9P0L9 805 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 ASTN1O14525 1302 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 MYBL1P10243 752 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 ALDH5A1P51649 535 aaPredicted RBP19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 DAAM2Q86T65 1068 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 KCNV2Q8TDN2 545 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.09■□□□□ 0.657e-11■■□□□ 13.1
SQSTM1-202ENST00000389805 TMOD2Q9NZR1 351 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 ZBTB21Q9ULJ3 1066 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 TBCAO75347 108 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 NR3C1P04150 777 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 ARP10275 920 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 PTK2Q05397 1052 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 COG2Q14746 738 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 DLGAP5Q15398 846 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 ASIC2Q16515 512 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 DPY19L2P1Q6NXN4 242 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.09■□□□□ 0.653e-7■■■■■ 32.1
SQSTM1-202ENST00000389805 AZI2Q9H6S1 392 aa19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 NOP53Q9NZM5 478 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 AJAP1Q9UKB5 411 aaPredicted RBP19.09■□□□□ 0.65
SQSTM1-202ENST00000389805 EYA4O95677 639 aa19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 CYP3A4P08684 503 aa19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 CCDC38Q502W7 563 aa19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 MYCT1Q8N699 235 aa19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 TLCD1Q96CP7 247 aa19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 CNOT10Q9H9A5 744 aaKnown RBP19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 SPATS2LQ9NUQ6 558 aaKnown RBP19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 HERC5Q9UII4 1024 aaKnown RBP19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 UTP11Q9Y3A2 253 aaKnown RBP19.08■□□□□ 0.65
SQSTM1-202ENST00000389805 PIK3CDO00329 1044 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 PON1P27169 355 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 HOXA7P31268 230 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 C11orf91Q3C1V1 193 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 PEX26Q7Z412 305 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 ERICH1Q86X53 443 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 ACTRT1Q8TDG2 376 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 L3MBTL3Q96JM7 780 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 PBKQ96KB5 322 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 FMO2Q99518 471 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 INTS9Q9NV88 658 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 DDX39AO00148 427 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 IGF2BP3O00425 579 aaKnown RBP eCLIP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 KIF3CO14782 793 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 TGFB1I1O43294 461 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 PSMD10O75832 226 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 POLR2MP0CAP2 368 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 XRCC5P13010 732 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 UCHL3P15374 230 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 EN1Q05925 392 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 MGARPQ8TDB4 240 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 SAAL1Q96ER3 474 aa19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 POLR3CQ9BUI4 534 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-202ENST00000389805 ZNF646O15015 1829 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 AFPP02771 609 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 NQO1P15559 274 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 LRRC14Q15048 493 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 CRELD2Q6UXH1 353 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 TAX1BP1Q86VP1 789 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 LARGE2Q8N3Y3 721 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 ATXN2LQ8WWM7 1075 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 TRIM33Q9UPN9 1127 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 CNTNAP1P78357 1384 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 PDXKO00764 312 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 DGKZQ13574 1117 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 EXOC3L4Q17RC7 722 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 THEMIS2Q5TEJ8 643 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 TRMT1LQ7Z2T5 733 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 ZNF571Q7Z3V5 609 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 IRF2BP2Q7Z5L9 587 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 FRMD5Q7Z6J6 570 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 SPDYE1Q8NFV5 336 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 SYN2Q92777 582 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 ADAM7Q9H2U9 754 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 ECT2Q9H8V3 914 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 BATF3Q9NR55 127 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 AIPL1Q9NZN9 384 aa19.07■□□□□ 0.64
SQSTM1-202ENST00000389805 SLC15A2Q16348 729 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 PIGWQ7Z7B1 504 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 CCDC26Q8TAB7 109 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 AP1G2O75843 785 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 PLTPP55058 493 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 PLS1Q14651 629 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 CDCA2Q69YH5 1023 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 C1orf186Q6ZWK4 172 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 OGFOD1Q8N543 542 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 GLG1Q92896 1179 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 AGBL1Q96MI9 1066 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 NUCKS1Q9H1E3 243 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 MLXIPLQ9NP71 852 aa19.06■□□□□ 0.64
SQSTM1-202ENST00000389805 SLC26A4O43511 780 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms