RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ARL4CP56559 192 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 FAM47EQ6ZV65 393 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 RHOT1Q8IXI2 618 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 CCT6BQ92526 530 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 GABBR1Q9UBS5 961 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 FRMD3A2A2Y4 597 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 DCTN3O75935 186 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 ZNF394Q53GI3 561 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 TTC13Q8NBP0 860 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 MED10Q9BTT4 135 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 ZWILCHQ9H900 591 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 LRRC10BA6NIK2 292 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 BMP6P22004 513 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 TBXAS1P24557 533 aaPredicted RBP17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 DRP2Q13474 957 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 RCN2Q14257 317 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 ZNF449Q6P9G9 518 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 GINM1Q9NU53 330 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 INTUQ9ULD6 942 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 PHF2O75151 1096 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 ZC2HC1CQ53FD0 456 aaPredicted RBP17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 MLXIPLQ9NP71 852 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 PRR12Q9ULL5 1215 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 AGTP01019 485 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 AGBL2Q5U5Z8 902 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 TRIM72Q6ZMU5 477 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 HACE1Q8IYU2 909 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 PDCD7Q8N8D1 485 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 UVRAGQ9P2Y5 699 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 NAGPAQ9UK23 515 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 AKT3Q9Y243 479 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 GPD1LQ8N335 351 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 OR2W6PQ8NHA6 318 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 SUPT20HL1Q3ZLR7 823 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 TXNRD3Q86VQ6 643 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 FBXO41Q8TF61 875 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 TIPINQ9BVW5 301 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 GOLPH3Q9H4A6 298 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 NOP53Q9NZM5 478 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 GMNNO75496 209 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 FGFR4P22455 802 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 GNA15P30679 374 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 KRT17Q04695 432 aa17.22■□□□□ 0.35
PTPRN2-201ENST00000389413 SCP2P22307 547 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 EEPD1Q7L9B9 569 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 PCGF5Q86SE9 256 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 NSMCE1Q8WV22 266 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 DMGDHQ9UI17 866 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 M0QZ92 97 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 LRRC14Q15048 493 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 IP6K2Q9UHH9 426 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 TTC7AQ9ULT0 858 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 UBE4BO95155 1302 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 NOL3O60936 208 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 ATP5HO75947 161 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 FAM149B1Q96BN6 582 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 HEXIM2Q96MH2 286 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 PCDHA10Q9Y5I2 948 aa17.21■□□□□ 0.35
PTPRN2-201ENST00000389413 TAF11Q15544 211 aa17.21■□□□□ 0.34
PTPRN2-201ENST00000389413 SULF1Q8IWU6 871 aa17.21■□□□□ 0.34
PTPRN2-201ENST00000389413 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.34
PTPRN2-201ENST00000389413 INTS13Q9NVM9 706 aa17.21■□□□□ 0.34
PTPRN2-201ENST00000389413 SYNJ2BP-COX16A0A087WUM0 186 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 GIPC1O14908 333 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 SLC1A1P43005 524 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 STXBP2Q15833 593 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 VPS72Q15906 364 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 SPATA31A5Q5VU36 1347 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 SPATA31A7Q8IWB4 1347 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 ATL2Q8NHH9 583 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 THOC1Q96FV9 657 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 COX16Q9P0S2 106 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 STRIP2Q9ULQ0 834 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 ENTPD3O75355 529 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 ZBED1O96006 694 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 PSMD6Q15008 389 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 SNRNP48Q6IEG0 339 aaKnown RBP17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
PTPRN2-201ENST00000389413 JAMLQ86YT9 394 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms