RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 FAM111BQ6SJ93 734 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 DOK3Q7L591 496 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 APBB1IPQ7Z5R6 666 aaPredicted RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 DDX42Q86XP3 938 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF808Q8N4W9 903 aaPredicted RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 LILRA3Q8N6C8 439 aaPredicted RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 SNX33Q8WV41 574 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 SSH1Q8WYL5 1049 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 EAF2Q96CJ1 260 aaPredicted RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 FAM89AQ96GI7 184 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 UIMC1Q96RL1 719 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 GPR20Q99678 358 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 ANO3Q9BYT9 981 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 PUS7LQ9H0K6 701 aaKnown RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 KCTD10Q9H3F6 313 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 TMPRSS5Q9H3S3 457 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 DEF6Q9H4E7 631 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 AURKAIP1Q9NWT8 199 aaPredicted RBP3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 SH3BP1Q9Y3L3 701 aa3.25□□□□□ -1.89
RNU6-541P-201ENST00000384709 A0A1W2PRX2 142 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CYP27B1O15528 508 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ALDH1A2O94788 518 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 PEX11BO96011 259 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MTHFD2P13995 350 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CANXP27824 592 aaKnown RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MSX2P35548 267 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 RABGGTBP53611 331 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 LGALS4P56470 323 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 TMPRSS15P98073 1019 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ACAP1Q15027 740 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MUM1Q2TAK8 710 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CT47A1Q5JQC4 288 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MIIPQ5JXC2 388 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 RNF187Q5TA31 235 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 C1QL3Q5VWW1 255 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF585AQ6P3V2 769 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CCDC62Q6P9F0 684 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF662Q6ZS27 426 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 HDGFL2Q7Z4V5 671 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 TMPRSS6Q8IU80 811 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CMIPQ8IY22 773 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ANKRD35Q8N283 1001 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 CBARPQ8N350 705 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MSL3Q8N5Y2 521 aaKnown RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MDGA1Q8NFP4 955 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 TSPEARQ8WU66 669 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MIEF2Q96C03 454 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF503Q96F45 646 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 RPL10LQ96L21 214 aaKnown RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 OR14A2Q96R54 314 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 TCF25Q9BQ70 676 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF277Q9NRM2 450 aaPredicted RBP3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ING3Q9NXR8 418 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 MCM8Q9UJA3 840 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 USP18Q9UMW8 372 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 ATP8A1Q9Y2Q0 1164 aa3.24□□□□□ -1.89
RNU6-541P-201ENST00000384709 UBE2QL1A1L167 161 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 KLRG2A4D1S0 409 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 HOXA3O43365 443 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 PHF2O75151 1096 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 GASTP01350 101 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 LPLP06858 475 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 CLEC2LP0C7M8 214 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 CTSSP25774 331 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 CRHR1P34998 444 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 WASP42768 502 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 PPARAQ07869 468 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 UBE3CQ15386 1083 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 DCAF17Q5H9S7 520 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 SPDYAQ5MJ70 313 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 IQSEC1Q6DN90 963 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 CRIP3Q6Q6R5 217 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 LMBR1LQ6UX01 489 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 BTNL9Q6UXG8 535 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 ABHD15Q6UXT9 468 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 GPRIN1Q7Z2K8 1008 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 THEMISQ8N1K5 641 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 D2HGDHQ8N465 521 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 AUTS2Q8WXX7 1259 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 HOXB13Q92826 284 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 FATE1Q969F0 183 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF512Q96ME7 567 aaPredicted RBP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 ADOQ96SZ5 270 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 TRIM8Q9BZR9 551 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 TLR9Q9NR96 1032 aa3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-541P-201ENST00000384709 GOLGA8AA7E2F4 631 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GOLGA8BA8MQT2 603 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GRXCR1A8MXD5 290 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 FZD9O00144 591 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 SUV39H1O43463 412 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 MFAP3LO75121 409 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 INSRRP14616 1297 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GYPEP15421 78 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 CNGA1P29973 690 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 RGS19P49795 217 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 NPEPPSP55786 919 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 MGAT5Q09328 741 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 KLF1Q13351 362 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms