RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 INPP5EQ9NRR6 644 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 GPATCH2Q9NW75 528 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 TPX2Q9ULW0 747 aaKnown RBP-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 CARHSP1Q9Y2V2 147 aaKnown RBP-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 THRAP3Q9Y2W1 955 aaKnown RBP-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ADAM18Q9Y3Q7 739 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 KIF25-AS1Q9Y6Z4 181 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 KCPQ6ZWJ8 1503 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 PCNX3Q9H6A9 2034 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 COL6A3P12111 3177 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ROS1P08922 2347 aa-1.58□□□□□ -2.66
RNU6-1340P-201ENST00000384438 FAT3Q8TDW7 4589 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 A0A087X002 238 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 BTBD18B2RXH4 712 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 H0Y9J4 135 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 AMBPP02760 352 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 CYP11A1P05108 521 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 CTSAP10619 480 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ZNF17P17021 662 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 NDUFV2P19404 249 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 IARSP41252 1262 aaKnown RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 NR0B1P51843 470 aaKnown RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 HIRAP54198 1017 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 IL9RQ01113 521 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 POU3F1Q03052 451 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 MTA1Q13330 715 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 NFYCQ13952 458 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 TBC1D25Q3MII6 688 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ZNF568Q3ZCX4 644 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 C1QL3Q5VWW1 255 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 GTF2IRD2BQ6EKJ0 949 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 WBP2NLQ6ICG8 309 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 SPSB3Q6PJ21 355 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 SHC4Q6S5L8 630 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 NOTCH2NLQ7Z3S9 236 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ABI3BPQ7Z7G0 1075 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 GTF2IRD2Q86UP8 949 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ZNF440Q8IYI8 595 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 SYNPOQ8N3V7 929 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 FNBP4Q8N3X1 1017 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 SLC44A3Q8N4M1 653 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 RNF214Q8ND24 703 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 GAB3Q8WWW8 586 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ASB10Q8WXI3 467 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 SLC25A28Q96A46 364 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 DDX50Q9BQ39 737 aaKnown RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 FAM110AQ9BQ89 295 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 MRPL44Q9H9J2 332 aaKnown RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 POT1Q9NUX5 634 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 Q9UF83 564 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ZMYM5Q9UJ78 669 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 FBXO3Q9UK99 471 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 ZNF777Q9ULD5 760 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 PCDHGB1Q9Y5G3 927 aa-1.59□□□□□ -2.66
RNU6-1340P-201ENST00000384438 MYO10Q9HD67 2058 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 VWFP04275 2813 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BRWD3Q6RI45 1802 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 A0A1W2PQ45 241 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 A0A1W2PQY0 241 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 POM121CA8CG34 1229 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 AHRRA9YTQ3 701 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MAN2B1O00754 1011 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF324O75467 553 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PAPSS2O95340 614 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PPP1R3DO95685 299 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF853P0CG23 659 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF888P0CJ79 500 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GPTP24298 496 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 BMPR1AP36894 532 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 GPM6AP51674 278 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 DSCR9P59020 149 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 DMP1Q13316 513 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SLC9A5Q14940 896 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NOLC1Q14978 699 aaKnown RBP eCLIP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SS18Q15532 418 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TMEM30BQ3MIR4 351 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 RASIP1Q5U651 963 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 NUTM2DQ5VT03 806 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 C9orf57Q5W0N0 161 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 LARP1BQ659C4 914 aaKnown RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CRTC3Q6UUV7 619 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 IGFL2Q6UWQ7 119 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PGBD5Q8N414 524 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ENGASEQ8NFI3 743 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CMASQ8NFW8 434 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 FAM104AQ969W3 186 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 POM121Q96HA1 1249 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZIM3Q96PE6 472 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 MNTQ99583 582 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 TRIM56Q9BRZ2 755 aaKnown RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PHACTR1Q9C0D0 580 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 CPNE5Q9HCH3 593 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 SSU72Q9NP77 194 aaKnown RBP-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 KRT82Q9NSB4 513 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 IMPACTQ9P2X3 320 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 PRODH2Q9UF12 536 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 ZNF407Q9C0G0 2248 aa-1.6□□□□□ -2.67
RNU6-1340P-201ENST00000384438 RPTORQ8N122 1335 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms