RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 SPIRE2Q8WWL2 714 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 LARP4BQ92615 738 aaKnown RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 MPP4Q96JB8 637 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 DNAJC1Q96KC8 554 aaKnown RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 ASCC2Q9H1I8 757 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 RIC8AQ9NPQ8 531 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 GYG2O15488 501 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 BAG2O95816 211 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 KYNUQ16719 465 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 EPM2AIP1Q7L775 607 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 HAUS1Q96CS2 278 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 AK8Q96MA6 479 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 ANKRD63C9JTQ0 380 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 DDAH1O94760 285 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 PDE8BO95263 885 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 PSMG1O95456 288 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 RRP1BQ14684 758 aaKnown RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 ST13P4Q8IZP2 240 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 DDX12PQ92771 950 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 CYTH2Q99418 400 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 MIS12Q9H081 205 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 WASF2Q9Y6W5 498 aa20.34■□□□□ 0.85
SMARCD1-201ENST00000381513 PODXLO00592 558 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 UCHL3P15374 230 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 TNFAIP8L3Q5GJ75 292 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 PHLDB3Q6NSJ2 640 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 IZUMO2Q6UXV1 221 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 SLFN11Q7Z7L1 901 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 KBTBD2Q8IY47 623 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 AZIN2Q96A70 460 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 FAM163AQ96GL9 167 aaPredicted RBP20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 UBN1Q9NPG3 1134 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 CLIC5Q9NZA1 410 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 DCTN4Q9UJW0 460 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 PCDHA6Q9UN73 950 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 PCDHA8Q9Y5H6 950 aa20.33■□□□□ 0.85
SMARCD1-201ENST00000381513 CFAP69A5D8W1 941 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 DDX3XO00571 662 aaKnown RBP eCLIP20.33■□□□□ 0.843e-9■■■■□ 25.1
SMARCD1-201ENST00000381513 THAP12O43422 761 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 EYA4O95677 639 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 PHKG2P15735 406 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 DRG2P55039 364 aaKnown RBP20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 SLC4A8Q2Y0W8 1093 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 DCAF17Q5H9S7 520 aaPredicted RBP20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 MTDHQ86UE4 582 aaKnown RBP20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 CYP4X1Q8N118 509 aa20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 IQCGQ9H095 443 aaKnown RBP20.33■□□□□ 0.84
SMARCD1-201ENST00000381513 RASA4BC9J798 803 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 RASA4O43374 803 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 PHF2O75151 1096 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 GCP02774 474 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 AP1B1Q10567 949 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 THOC5Q13769 683 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 CADM1Q9BY67 442 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 GANQ9H2C0 597 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 MROH7Q68CQ1 1323 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 ITGA2BP08514 1039 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 CBX3Q13185 183 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 TMED2Q15363 201 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 WDR72Q3MJ13 1102 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 RBM26Q5T8P6 1007 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 CCDC125Q86Z20 511 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 LENG1Q96BZ8 264 aaPredicted RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 OLFM3Q96PB7 478 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 SMC6Q96SB8 1091 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 MIPEPQ99797 713 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 MYH4Q9Y623 1939 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 RBM47A0AV96 593 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 ECE2O60344 883 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 GFPT2O94808 682 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 CHRNA3P32297 505 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 SPTY2D1Q68D10 685 aaPredicted RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 ALG3Q92685 438 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 ASIC3Q9UHC3 531 aa20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 PAIP2BQ9ULR5 123 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-201ENST00000381513 TMEM2Q9UHN6 1383 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 PVALEFA0A1B0GWK0 134 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 GSTTP1A0A1W2PQM5 241 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 VAV1P15498 845 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 CTTNQ14247 550 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 TMEM266Q2M3C6 531 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 MARK2Q7KZI7 788 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 SYNCQ9H7C4 482 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 MAP7D3Q8IWC1 876 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 PROM2Q8N271 834 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 SH3TC2Q8TF17 1288 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 TTC1Q99614 292 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 DDX3YO15523 660 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 ZBTB16Q05516 673 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 GSTA3Q16772 222 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 TRMT10CQ7L0Y3 403 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms