RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 MCF2LO15068 1137 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
GABPB1-203ENST00000380877 PSMA2P25787 234 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 DR1Q01658 176 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 MFSD14CQ5VZR4 134 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-203ENST00000380877 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
GABPB1-203ENST00000380877 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
GABPB1-203ENST00000380877 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 CYP26A1O43174 497 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 EPHX2P34913 555 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 MKL1Q969V6 931 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 ABCB6Q9NP58 842 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 ARL4AP40617 200 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 KLK7P49862 253 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 MICALL1Q8N3F8 863 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 CALB1P05937 261 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 CABS1Q96KC9 395 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 AGPAT3Q9NRZ7 376 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 HAUS2Q9NVX0 235 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 HUS1O60921 280 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 PPFIA4O75335 1185 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 CELF2O95319 508 aaKnown RBP13.13□□□□□ -0.31
GABPB1-203ENST00000380877 MUTP22033 750 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 GNGT1P63211 74 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 FYB2Q5VWT5 728 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 NUP85Q9BW27 656 aa13.13□□□□□ -0.31
GABPB1-203ENST00000380877 MAGEB2O15479 319 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 STX2P32856 288 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 GIT2Q14161 759 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 NCAPHQ15003 741 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 CDO1Q16878 200 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-203ENST00000380877 INPP5FQ9Y2H2 1132 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
GABPB1-203ENST00000380877 EVI5O60447 810 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 LPXNO60711 386 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 OATP04181 439 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
GABPB1-203ENST00000380877 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 MAD1L1Q9Y6D9 718 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 A0A087X0B3 334 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 FGRP09769 529 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 GPRC5CQ9NQ84 441 aa13.12□□□□□ -0.31
GABPB1-203ENST00000380877 FAM86B1E9PN63 330 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 FAM86B2P0C5J1 330 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 ZNF18P17022 549 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CYP2B6P20813 491 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CASP8Q14790 479 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 TRIP13Q15645 432 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CYP4F22Q6NT55 531 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 SLC30A10Q6XR72 485 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 TRIM72Q6ZMU5 477 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CCDC13Q8IYE1 715 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 FMO2Q99518 471 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 HGSO14964 777 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 YWHAGP61981 247 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CCDC6Q16204 474 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 WDR72Q3MJ13 1102 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 GPC2Q8N158 579 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 WHAMMQ8TF30 809 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 C17orf75Q9HAS0 396 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 NFU1Q9UMS0 254 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 MRFAP1Q9Y605 127 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 A0A1W2PQJ5 194 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 HBP1O60381 514 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 TCF7P36402 384 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 ZNF211Q13398 564 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 KIAA1841Q6NSI8 718 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 HVCN1Q96D96 273 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 BUB1BO60566 1050 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 IER5Q5VY09 327 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 EMBQ6PCB8 327 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms