RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 BMP6P22004 513 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 SFPQP23246 707 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMN2-202ENST00000380742 RFC2P35250 354 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 KCNA1Q09470 495 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 NFX1Q12986 1120 aaKnown RBP20.67■□□□□ 0.9
SMN2-202ENST00000380742 PAK2Q13177 524 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 MORC3Q14149 939 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 FAM187BQ17R55 369 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 PLEKHG4Q58EX7 1191 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 ZNF658Q5TYW1 1059 aaPredicted RBP20.67■□□□□ 0.9
SMN2-202ENST00000380742 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 CATSPER4Q7RTX7 472 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 DEFB128Q7Z7B8 93 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 SMYD4Q8IYR2 804 aaPredicted RBP20.67■□□□□ 0.9
SMN2-202ENST00000380742 SCFD1Q8WVM8 642 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 SYAP1Q96A49 352 aaPredicted RBP20.67■□□□□ 0.9
SMN2-202ENST00000380742 PCDHB13Q9Y5F0 798 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 NR2E3Q9Y5X4 410 aa20.67■□□□□ 0.9
SMN2-202ENST00000380742 ACKR2O00590 384 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 GPR182O15218 404 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 TSPAN1O60635 241 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 SCP2P22307 547 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 HOXD13P35453 343 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 TCTN1Q2MV58 587 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 ZNF507Q8TCN5 953 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 HVCN1Q96D96 273 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 IFIH1Q9BYX4 1025 aaKnown RBP20.66■□□□□ 0.9
SMN2-202ENST00000380742 TMX1Q9H3N1 280 aa20.66■□□□□ 0.9
SMN2-202ENST00000380742 EIF3DO15371 548 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMN2-202ENST00000380742 ERLIN2O94905 339 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 STRN3Q13033 797 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 ALCAMQ13740 583 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 PCBP1Q15365 356 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMN2-202ENST00000380742 L1TD1Q5T7N2 865 aaKnown RBP20.65■□□□□ 0.9
SMN2-202ENST00000380742 MAP4K3Q8IVH8 894 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 DBF4BQ8NFT6 615 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 IKZF4Q9H2S9 585 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 MAPK8IP1Q9UQF2 711 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 CNTNAP2Q9UHC6 1331 aa20.65■□□□□ 0.9
SMN2-202ENST00000380742 ARF4P18085 180 aaPredicted RBP20.64■□□□□ 0.89
SMN2-202ENST00000380742 HOXA11P31270 313 aaPredicted RBP20.64■□□□□ 0.89
SMN2-202ENST00000380742 ABCD1P33897 745 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 PRPF4BQ13523 1007 aaKnown RBP20.64■□□□□ 0.89
SMN2-202ENST00000380742 BMT2Q1RMZ1 405 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 STXBP4Q6ZWJ1 553 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 TRIML1Q8N9V2 468 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 CPB2Q96IY4 423 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 TARS2Q9BW92 718 aaKnown RBP20.64■□□□□ 0.89
SMN2-202ENST00000380742 IL23AQ9NPF7 189 aa20.64■□□□□ 0.89
SMN2-202ENST00000380742 MGEA5O60502 916 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 ACRP10323 421 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 PRCPP42785 496 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 FPGSQ05932 587 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 C16orf59Q7L2K0 433 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 NELFCDQ8IXH7 590 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 MYOCDQ8IZQ8 938 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 SEPT8Q92599 483 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 ACCSQ96QU6 501 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 ACO2Q99798 780 aaKnown RBP20.63■□□□□ 0.89
SMN2-202ENST00000380742 MRPL4Q9BYD3 311 aaKnown RBP20.63■□□□□ 0.89
SMN2-202ENST00000380742 PIN4Q9Y237 131 aaKnown RBP20.63■□□□□ 0.89
SMN2-202ENST00000380742 UBE4BO95155 1302 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 ZMYM2Q9UBW7 1377 aa20.63■□□□□ 0.89
SMN2-202ENST00000380742 PIGRP01833 764 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 CD44P16070 742 aaKnown RBP20.62■□□□□ 0.89
SMN2-202ENST00000380742 AXLP30530 894 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 EPHB4P54760 987 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 PPIGQ13427 754 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMN2-202ENST00000380742 DSC3Q14574 896 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 COBLL1Q53SF7 1204 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 SLC39A4Q6P5W5 647 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 CDR2LQ86X02 465 aaPredicted RBP20.62■□□□□ 0.89
SMN2-202ENST00000380742 RPUSD2Q8IZ73 545 aaKnown RBP20.62■□□□□ 0.89
SMN2-202ENST00000380742 PTPRSQ13332 1948 aa20.62■□□□□ 0.89
SMN2-202ENST00000380742 A0A1B0GUA9 196 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 TISP43B9A030 160 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 ANKRD63C9JTQ0 380 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 ATF7IP2Q5U623 682 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 EEF1DP3Q658K8 133 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 CNKSR3Q6P9H4 555 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 RTN4RL1Q86UN2 441 aaPredicted RBP20.61■□□□□ 0.89
SMN2-202ENST00000380742 GUF1Q8N442 669 aaKnown RBP20.61■□□□□ 0.89
SMN2-202ENST00000380742 LINC01599Q8WXQ3 324 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 APBB2Q92870 758 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 BICD1Q96G01 975 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 LBHD1Q9BQE6 289 aaPredicted RBP20.61■□□□□ 0.89
SMN2-202ENST00000380742 GTPBP4Q9BZE4 634 aaKnown RBP20.61■□□□□ 0.89
SMN2-202ENST00000380742 PDZD7Q9H5P4 517 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 TMEM206Q9H813 350 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 PTPRHQ9HD43 1115 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 CHST12Q9NRB3 414 aa20.61■□□□□ 0.89
SMN2-202ENST00000380742 PPP1R3GB7ZBB8 358 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 HNRNPDLO14979 420 aaKnown RBP20.6■□□□□ 0.89
SMN2-202ENST00000380742 TGFB1I1O43294 461 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 PFKMP08237 780 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 NLRP12P59046 1061 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 NCBP1Q09161 790 aaKnown RBP20.6■□□□□ 0.89
SMN2-202ENST00000380742 KNOP1Q1ED39 458 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms