RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RASA4O43374 803 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 MLH1P40692 756 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 C11orf70Q9BRQ4 267 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 TLR7Q9NYK1 1049 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 MAPK13O15264 365 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 FGGP02679 453 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RGS7P49802 495 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 RAD51Q06609 339 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 ST13P4Q8IZP2 240 aaPredicted RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 RIN3Q8TB24 985 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 PPP1R13BQ96KQ4 1090 aa13.19□□□□□ -0.3
CHD3-203ENST00000380358 PAPOLBQ9NRJ5 636 aaKnown RBP13.19□□□□□ -0.3
CHD3-203ENST00000380358 ZNF197O14709 1029 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 CACUL1Q86Y37 369 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 LATS2Q9NRM7 1088 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 SLC25A13Q9UJS0 675 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 CDC16Q13042 620 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 C16orf62Q7Z3J2 963 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■■ 29
CHD3-203ENST00000380358 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 SPACA7Q96KW9 195 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 EXOSC4Q9NPD3 245 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 RARBP10826 455 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 RALAP11233 206 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 DGKHQ86XP1 1220 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 IPCEF1Q8WWN9 437 aaPredicted RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 CYP7B1O75881 506 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 CASP1P29466 404 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 TMEM63CQ9P1W3 806 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 MMP10P09238 476 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 GPS1Q13098 491 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 COMMD2Q86X83 199 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 DIS3LQ8TF46 1054 aaKnown RBP13.18□□□□□ -0.3
CHD3-203ENST00000380358 PARVBQ9HBI1 364 aa13.18□□□□□ -0.3
CHD3-203ENST00000380358 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 PYGBP11216 843 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 FAM102AQ5T9C2 384 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 CYGBQ8WWM9 190 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 KDM1AO60341 852 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 TSC22D2O75157 780 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 SULT1E1P49888 294 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 SESN2P58004 480 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 CUL3Q13618 768 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 PID1Q7Z2X4 250 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 NEUROD4Q9HD90 331 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 ZNF302Q9NR11 478 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 IKBKBO14920 756 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 LZTS3O60299 673 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 GYS1P13807 737 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 ARHGEF7Q14155 803 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 ARHGAP17Q68EM7 881 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 BZW1Q7L1Q6 419 aaKnown RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 TTLL6Q8N841 843 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
CHD3-203ENST00000380358 ZFP69BQ9UJL9 534 aa13.17□□□□□ -0.3
CHD3-203ENST00000380358 STAT3P40763 770 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms