RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 GJB5O95377 273 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 IGFBP4P22692 258 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 EFNA5P52803 228 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 POU5F1BQ06416 359 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 COASYQ13057 564 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.04
UPK1A-202ENST00000379013 RBM43Q6ZSC3 357 aaKnown RBP15.28■□□□□ 0.04
UPK1A-202ENST00000379013 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 GRAMD1CQ8IYS0 662 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 SPATA20Q8TB22 786 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 DNAJB3Q8WWF6 145 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 SPIRE2Q8WWL2 714 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 HVCN1Q96D96 273 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 SH2D3AQ9BRG2 576 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 INO80BQ9C086 356 aaPredicted RBP15.28■□□□□ 0.04
UPK1A-202ENST00000379013 BLZF1Q9H2G9 400 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 SUCLA2Q9P2R7 463 aaPredicted RBP15.28■□□□□ 0.04
UPK1A-202ENST00000379013 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
UPK1A-202ENST00000379013 SIP14410 1827 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 TLL1O43897 1013 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.04
UPK1A-202ENST00000379013 ARL2P36404 184 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 PHKA2P46019 1235 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 IKBKEQ14164 716 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 FAM26FQ5R3K3 315 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 RHPN2Q8IUC4 686 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 LRRC71Q8N4P6 559 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 DEPTORQ8TB45 409 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 ARNTL2Q8WYA1 636 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 TMEM143Q96AN5 459 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 NFKBIZQ9BYH8 718 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 AGO3Q9H9G7 860 aaKnown RBP15.27■□□□□ 0.04
UPK1A-202ENST00000379013 MRPL44Q9H9J2 332 aaKnown RBP15.27■□□□□ 0.04
UPK1A-202ENST00000379013 KMT5AQ9NQR1 393 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 XPNPEP1Q9NQW7 623 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 TMEM63CQ9P1W3 806 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
UPK1A-202ENST00000379013 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 CCDC169A6NNP5 214 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 EIF3DO15371 548 aaKnown RBP eCLIP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 CAVIN2O95810 425 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 CCDC192P0DO97 292 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 CLCN3P51790 818 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 LPIN1Q14693 890 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 ZNF658Q5TYW1 1059 aaPredicted RBP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 RTN4RL1Q86UN2 441 aaPredicted RBP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 LINC01465Q8N7H1 131 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 RAD9AQ99638 391 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 FAM49AQ9H0Q0 323 aaPredicted RBP15.26■□□□□ 0.03
UPK1A-202ENST00000379013 ST6GALNAC4Q9H4F1 302 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 CDHR5Q9HBB8 845 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
UPK1A-202ENST00000379013 K7ENM7 598 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 GHRP10912 638 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 KCNJ6P48051 423 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 SARSP49591 514 aaKnown RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 PEX3P56589 373 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 NCBP1Q09161 790 aaKnown RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 TMEM62Q0P6H9 643 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 LAMTOR4Q0VGL1 99 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 STRN3Q13033 797 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 STX1AQ16623 288 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 SFR1Q86XK3 245 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 KIAA0319LQ8IZA0 1049 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 PRPF31Q8WWY3 499 aaKnown RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 NLRP7Q8WX94 980 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 KCNN1Q92952 543 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 GAS2L1Q99501 681 aaPredicted RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 NTPCRQ9BSD7 190 aaKnown RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 GCOM2Q9BZD3 368 aaPredicted RBP15.25■□□□□ 0.03
UPK1A-202ENST00000379013 ANO10Q9NW15 660 aa15.25■□□□□ 0.03
UPK1A-202ENST00000379013 NPHP3-ACAD11A0A0J9YXS1 232 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 LINC01553A4QN01 128 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 KLRC4O43908 158 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 GCNT3O95395 438 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 GLRA2P23416 452 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 NPTX2P47972 431 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 NCKAP1LP55160 1127 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 MRPS6P82932 125 aaKnown RBP15.24■□□□□ 0.03
UPK1A-202ENST00000379013 HTRA4P83105 476 aaPredicted RBP15.24■□□□□ 0.03
UPK1A-202ENST00000379013 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
UPK1A-202ENST00000379013 MAPK7Q13164 816 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 ZSCAN23Q3MJ62 389 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 COBLL1Q53SF7 1204 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 FBXO47Q5MNV8 452 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
UPK1A-202ENST00000379013 SRGAP1Q7Z6B7 1085 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 DAW1Q8N136 415 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
UPK1A-202ENST00000379013 TOP1MTQ969P6 601 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms