RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 NR3C1P04150 777 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 ABHD2P08910 425 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 MUTP22033 750 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 HSPA1LP34931 641 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 PSMC2P35998 433 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 COILP38432 576 aaPredicted RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 RPL21P46778 160 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 DYNC1I2Q13409 638 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 STAT4Q14765 748 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 DCAF12L1Q5VU92 463 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 CWF19L1Q69YN2 538 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 ARHGAP18Q8N392 663 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 SYT2Q8N9I0 419 aaPredicted RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 LNX1Q8TBB1 728 aaPredicted RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 PIGOQ8TEQ8 1089 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 HAS1Q92839 578 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 PIGSQ96S52 555 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 EYA3Q99504 573 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 TSC22D3Q99576 134 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 OSBPL1AQ9BXW6 950 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 SEMA4AQ9H3S1 761 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 KIF9Q9HAQ2 790 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 SEL1LQ9UBV2 794 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 PPP1R9AQ9ULJ8 1098 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 USP20Q9Y2K6 914 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 TMEM120BA0PK00 339 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 BACH1O14867 736 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 ECE2O60344 883 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 CDH16O75309 829 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 GZMAP12544 262 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 ATP4AP20648 1035 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 POLGP54098 1239 aaPredicted RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 RASA2Q15283 850 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 NUGGCQ68CJ6 796 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 INTS5Q6P9B9 1019 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 CCDC137Q6PK04 289 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 EP400NLQ6ZTU2 488 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 C15orf52Q6ZUT6 534 aaKnown RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 SDCCAG8Q86SQ7 713 aaPredicted RBP8.82□□□□□ -1
PTPRR-203ENST00000378778 ERICH1Q86X53 443 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 SLF2Q8IX21 1173 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 GALNT15Q8N3T1 639 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 PRELID2Q8N945 189 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 OLIG1Q8TAK6 271 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 BORCS6Q96GS4 357 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 FAM192AQ9GZU8 254 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 DCLRE1BQ9H816 532 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 STX8Q9UNK0 236 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 NIP7Q9Y221 180 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRR-203ENST00000378778 ASB3Q9Y575 518 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 COL14A1Q05707 1796 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 USP17L3A6NCW0 530 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 USP17L4A6NCW7 530 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 TDP2O95551 362 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 ECEL1O95672 775 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 LDHBP07195 334 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 LINGO3P0C6S8 592 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 KRT13P13646 458 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 STX2P32856 288 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 PAPOLAP51003 745 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 KLC1Q07866 573 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 AP3B2Q13367 1082 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 RRP1BQ14684 758 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 VSTM1Q6UX27 236 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 NELFCDQ8IXH7 590 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 FAM117AQ9C073 453 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 FGFR1OP2Q9NVK5 253 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 LNPEPQ9UIQ6 1025 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 DNM3Q9UQ16 869 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 KAT6BQ8WYB5 2073 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 STRCP1A6NGW2 1772 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 COL24A1Q17RW2 1714 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 PMM2O15305 246 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 EDIL3O43854 480 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 TTC4O95801 387 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 BCRP11274 1271 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 ACTN1P12814 892 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 GPC5P78333 572 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 GIT2Q14161 759 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 RHBDF2Q6PJF5 856 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 MTHFD1LQ6UB35 978 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 MIGA2Q7L4E1 593 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 TDRPQ86YL5 185 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 FITM2Q8N6M3 262 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 GLIS3Q8NEA6 775 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 ASAP3Q8TDY4 903 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 TGS1Q96RS0 853 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 NUDT12Q9BQG2 462 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 TRIM31Q9BZY9 425 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 NYXQ9GZU5 481 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 SSU72Q9NP77 194 aaKnown RBP8.81□□□□□ -1
PTPRR-203ENST00000378778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRR-203ENST00000378778 STOML1Q9UBI4 398 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms