RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ITGBL1O95965 494 aaPredicted RBP21.13■□□□□ 0.97
SSU72-204ENST00000378726 CTAGE8P0CG41 777 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 TRIM49P0CI25 452 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 TRIM49CP0CI26 452 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 KRT13P13646 458 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 UCHL3P15374 230 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 FMO5P49326 533 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 HUNKP57058 714 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 TTLL4Q14679 1199 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 TARBP2Q15633 366 aaKnown RBP21.13■□□□□ 0.97
SSU72-204ENST00000378726 CTAGE6Q86UF2 777 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 CTAGE4Q8IX94 777 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 SPATA33Q96N06 139 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 GCNT4Q9P109 453 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 ADSSP30520 456 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 AMPD2Q01433 879 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 INTS8Q75QN2 995 aaKnown RBP21.13■□□□□ 0.97
SSU72-204ENST00000378726 NOA1Q8NC60 698 aaKnown RBP21.13■□□□□ 0.97
SSU72-204ENST00000378726 ZSWIM2Q8NEG5 633 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 EXOC4Q96A65 974 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 PARK7Q99497 189 aaKnown RBP21.13■□□□□ 0.97
SSU72-204ENST00000378726 DEF6Q9H4E7 631 aa21.13■□□□□ 0.97
SSU72-204ENST00000378726 N4BP1O75113 896 aaKnown RBP21.12■□□□□ 0.97
SSU72-204ENST00000378726 ERLIN1O75477 346 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 CYP27A1Q02318 531 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 HGSNATQ68CP4 663 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 ABRAQ8N0Z2 381 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 SCFD2Q8WU76 684 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 MYO1AQ9UBC5 1043 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 TLR2O60603 784 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 RFC5P40937 340 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 LMAN1P49257 510 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 SPA17Q15506 151 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 SLC9C1Q4G0N8 1177 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 CBWD6Q4V339 395 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 CBWD3Q5JTY5 395 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 CBWD5Q5RIA9 395 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 VPS18Q9P253 973 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 ARHGAP28Q9P2N2 729 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 MYO6Q9UM54 1294 aa21.12■□□□□ 0.97
SSU72-204ENST00000378726 AKR1B10O60218 316 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 LGR5O75473 907 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 CAPN2P17655 700 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 ARL2P36404 184 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 VAMP7P51809 220 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 TUBB4BP68371 445 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 DLG4P78352 724 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 RAPGEF1Q13905 1077 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 KIAA1328Q86T90 577 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 HAUS4Q9H6D7 363 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 SIX2Q9NPC8 291 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 PSD3Q9NYI0 1048 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
SSU72-204ENST00000378726 GOLGA8IPA6NC78 632 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 GOLGA8JA6NMD2 632 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 H0YCG3 227 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 ZNF263O14978 683 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 MAPK13O15264 365 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 GLRA2P23416 452 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 MARK3P27448 753 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 KIF11P52732 1056 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 SLC20A2Q08357 652 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 PLPPR4Q7Z2D5 763 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 GPR142Q7Z601 462 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 DPP9Q86TI2 863 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 FAM167AQ96KS9 214 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 GUCA1BQ9UMX6 200 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 TFR2Q9UP52 801 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 DIS3Q9Y2L1 958 aaKnown RBP21.1■□□□□ 0.97
SSU72-204ENST00000378726 LRRC37A2A6NM11 1700 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 SERPING1P05155 500 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 ARID5AQ03989 594 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
SSU72-204ENST00000378726 ZSCAN26Q16670 478 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 TDRD12Q587J7 1177 aaKnown RBP21.1■□□□□ 0.97
SSU72-204ENST00000378726 BRDTQ58F21 947 aaPredicted RBP21.1■□□□□ 0.97
SSU72-204ENST00000378726 TAPT1Q6NXT6 567 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 TRIM50Q86XT4 487 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 ASAP3Q8TDY4 903 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 SPAG5Q96R06 1193 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 FBXL5Q9UKA1 691 aa21.1■□□□□ 0.97
SSU72-204ENST00000378726 ARID2Q68CP9 1835 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 SSU72P8A0A1W2PR75 194 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 MAFO75444 373 aaPredicted RBP21.09■□□□□ 0.97
SSU72-204ENST00000378726 ABCD1P33897 745 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 CCDC122Q5T0U0 273 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 SLC39A4Q6P5W5 647 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 ZNF662Q6ZS27 426 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 TAS1R3Q7RTX0 852 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 LCA5LO95447 670 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 NAMPTP43490 491 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 FAM110CQ1W6H9 321 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 ASTE1Q2TB18 679 aaPredicted RBP21.09■□□□□ 0.97
SSU72-204ENST00000378726 CHADLQ6NUI6 762 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 POMGNT1Q8WZA1 660 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 SAAL1Q96ER3 474 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 BICD1Q96G01 975 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 MCM3APO60318 1980 aa21.09■□□□□ 0.97
SSU72-204ENST00000378726 RCCD1A6NED2 376 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 LRRIQ4A6NIV6 560 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms