RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 AGPAT1Q99943 283 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 LRRC4Q9HBW1 653 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 NFIBO00712 420 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SART1O43290 800 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 INHBAP08476 426 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 BMP6P22004 513 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SURF1Q15526 300 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 XKR3Q5GH77 459 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SPOUT1Q5T280 376 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 STK33Q9BYT3 514 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SARSP49591 514 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 HNRNPH2P55795 449 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 MRPS9P82933 396 aaKnown RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 CENPPQ6IPU0 288 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 CDR2LQ86X02 465 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-203ENST00000378169 COG1Q8WTW3 980 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 ATP2A3Q93084 1043 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 SCINQ9Y6U3 715 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 C3P01024 1663 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 PLS3P13797 630 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 PRKCEQ02156 737 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 VPS52Q8N1B4 723 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 KIAA0895Q8NCT3 520 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 C1orf54Q8WWF1 131 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 STMN2Q93045 179 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
NPHP4-203ENST00000378169 EXOC1LA0A1B0GW35 172 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 WNT7AO00755 349 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 PPM1FP49593 454 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 SLMAPQ14BN4 828 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 DNAAF5Q86Y56 855 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 SREBF1P36956 1147 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 WDR72Q3MJ13 1102 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 CCDC62Q6P9F0 684 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 CCDC117Q8IWD4 279 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 CERS5Q8N5B7 392 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 TBC1D31Q96DN5 1066 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 MMP19Q99542 508 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 MRPL4Q9BYD3 311 aaKnown RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 RBM12Q9NTZ6 932 aaKnown RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 GOLGA8MH3BSY2 632 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 TROVE2P10155 538 aaKnown RBP eCLIP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 SCP2P22307 547 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 PHKA2P46019 1235 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 ITKQ08881 620 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 FAM193BQ96PV7 902 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 TMX2Q9Y320 296 aa14.12□□□□□ -0.15
NPHP4-203ENST00000378169 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-203ENST00000378169 CTIFO43310 598 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 CLTAP09496 248 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 ATP11AP98196 1134 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 KLHDC7AQ5VTJ3 777 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 KCNK18Q7Z418 384 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 TRIM59Q8IWR1 403 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 GDAP1Q8TB36 358 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 LRRC8CQ8TDW0 803 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 SCFD1Q8WVM8 642 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 TACO1Q9BSH4 297 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 MLXIPLQ9NP71 852 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 AGPAT3Q9NRZ7 376 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 WDR91A4D1P6 747 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 FOXP2O15409 715 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 SLC12A2P55011 1212 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 EHD4Q9H223 541 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 RRP15Q9Y3B9 282 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 CAPN6Q9Y6Q1 641 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 PODXLO00592 558 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 CIITAP33076 1130 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 GPC3P51654 580 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 GIT2Q14161 759 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 NBPF12Q5TAG4 269 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 SDCCAG8Q86SQ7 713 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 LRRC71Q8N4P6 559 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 CPA5Q8WXQ8 436 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 ANKRD7Q92527 254 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 TARS2Q9BW92 718 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 HEY1Q9Y5J3 304 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 PDE1BQ01064 536 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 TWF2Q6IBS0 349 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 CCDC137Q6PK04 289 aaKnown RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
NPHP4-203ENST00000378169 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-203ENST00000378169 TAF1DQ9H5J8 278 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms