RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 FAM161BQ96MY7 647 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 APOBEC2Q9Y235 224 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 PLEKHG1Q9ULL1 1385 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 H7C1W4 665 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 SOX5P35711 763 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 PROM2Q8N271 834 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 EIF2AQ9BY44 585 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 KLC2Q9H0B6 622 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 PNMA2Q9UL42 364 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ROBO2Q9HCK4 1378 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 CFAP73A6NFT4 308 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 DPEP1P16444 411 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 CCZ1BP86790 482 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 OCRLQ01968 901 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 SIX6OS1Q8N1H7 587 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 TTC25Q96NG3 672 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 LRRC1Q9BTT6 524 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 KLF15Q9UIH9 416 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 EPN3Q9H201 632 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ARL4DP49703 201 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 BLVRAP53004 296 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 SCARF1Q14162 830 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ZNF746Q6NUN9 644 aaPredicted RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ADAM22Q9P0K1 906 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 STOML1Q9UBI4 398 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ZNF233A6NK53 670 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 NSUN2Q08J23 767 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 KLC3Q6P597 504 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 KIF2CQ99661 725 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 POTECB2RU33 542 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ABCD1P33897 745 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 HLFQ16534 295 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 FAM83BQ5T0W9 1011 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ENAHQ8N8S7 591 aaPredicted RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 SNF8Q96H20 258 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 UPF3AQ9H1J1 476 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 AFF4Q9UHB7 1163 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ABCB11O95342 1321 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 WDR64B1ANS9 1081 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 PRELPP51888 382 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 FAM180AQ6UWF9 173 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ATP8B3O60423 1300 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 DEUP1Q05D60 604 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 ENTPD7Q9NQZ7 604 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 UBE2Q2LH0YL09 131 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 COPB2P35606 906 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 FCGRTP55899 365 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 NCAPHQ15003 741 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 RSPH10B2B2RC85 870 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 RSPH10BP0C881 870 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 KLHL38Q2WGJ6 581 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 C1orf54Q8WWF1 131 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 SRPK1Q96SB4 655 aaKnown RBP12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
PCDHA9-201ENST00000378122 DNAJC6O75061 913 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 KRT37O76014 449 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 CAV1Q03135 178 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 DRAP1Q14919 205 aaPredicted RBP12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 EXOC8Q8IYI6 725 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 BRAFP15056 766 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 MID2Q9UJV3 735 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 TAC1P20366 129 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 GPS1Q13098 491 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 WDR75Q8IWA0 830 aaKnown RBP12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
PCDHA9-201ENST00000378122 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms