RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TTI2Q6NXR4 508 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 CREBRFQ8IUR6 639 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 DHX38Q92620 1227 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 CCDC113Q9H0I3 377 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 CDY2AQ9Y6F7 541 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TISP43B9A030 160 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TLR3O15455 904 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TGFB1I1O43294 461 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 ERLIN2O94905 339 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 COL6A1P12109 1028 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 FGFR4P22455 802 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 MATR3P43243 847 aaKnown RBP eCLIP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 CRYBB1P53674 252 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 PRPF4BQ13523 1007 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 NCAPHQ15003 741 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 ZCWPW2Q504Y3 356 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 SRGAP1Q7Z6B7 1085 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 NECAB2Q7Z6G3 386 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 FAM126BQ8IXS8 530 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 DUSP9Q99956 384 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 SRRTQ9BXP5 876 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 MRPL4Q9BYD3 311 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 PRMT7Q9NVM4 692 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TRAF3IP3Q9Y228 551 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TRPV2Q9Y5S1 764 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 DCDC2CA8MYV0 355 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 DARSP14868 501 aaKnown RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 EN2P19622 333 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 EIF4BP23588 611 aaKnown RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 NR2F2P24468 414 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 ADAM9Q13443 819 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 SNX17Q15036 470 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 TRIM60Q495X7 471 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 ARMCX5Q6P1M9 558 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 GOLGA5Q8TBA6 731 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 TARS2Q9BW92 718 aaKnown RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 FZD8Q9H461 694 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 AGPAT3Q9NRZ7 376 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 SAMSN1Q9NSI8 373 aaKnown RBP14.19□□□□□ -0.14
CBWD3-203ENST00000377344 ATP11BQ9Y2G3 1177 aa14.19□□□□□ -0.14
CBWD3-203ENST00000377344 ANKRD63C9JTQ0 380 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 ACKR2O00590 384 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 B4GALT5O43286 388 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 NR3C1P04150 777 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 EDN1P05305 212 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CAPN2P17655 700 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CYP2J2P51589 502 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 FKBP3Q00688 224 aaKnown RBP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 PLCB2Q00722 1185 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 RPAINQ86UA6 219 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CCDC155Q8N6L0 562 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 POMGNT1Q8WZA1 660 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TCHPQ9BT92 498 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 PCIF1Q9H4Z3 704 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 ANKFY1Q9P2R3 1169 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 SIP14410 1827 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TTLL13PA6NNM8 815 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 FGFR1OPO95684 399 aaKnown RBP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CD4P01730 458 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CHRNA1P02708 482 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CKBP12277 381 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CDK11BP21127 795 aaKnown RBP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 SFPQP23246 707 aaKnown RBP eCLIP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 RPL13P26373 211 aaKnown RBP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TLE2Q04725 743 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TRIM71Q2Q1W2 868 aaKnown RBP14.18□□□□□ -0.14
CBWD3-203ENST00000377344 ZNF618Q5T7W0 954 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 KCNN1Q92952 543 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 CBWD1Q9BRT8 395 aa14.18□□□□□ -0.14
CBWD3-203ENST00000377344 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CETN3O15182 167 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 HARSP12081 509 aaKnown RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 SNRPFP62306 86 aaKnown RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 NCBP1Q09161 790 aaKnown RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 SLC39A4Q6P5W5 647 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 ZPBP2Q6X784 338 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CAGE1Q8TC20 777 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CPB2Q96IY4 423 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 ZBTB45Q96K62 511 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 GRPEL1Q9HAV7 217 aa14.17□□□□□ -0.14
CBWD3-203ENST00000377344 CGNQ9P2M7 1197 aaKnown RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 MAGEC2Q9UBF1 373 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-203ENST00000377344 KIAA0100Q14667 2235 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms