RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 FAM102AQ5T9C2 384 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 MTIF3Q9H2K0 278 aaKnown RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 SARS2Q9NP81 518 aaKnown RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 TADA2AO75478 443 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 FOXD4Q12950 439 aaPredicted RBP14.52□□□□□ -0.08
GPC6-201ENST00000377047 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.08
GPC6-201ENST00000377047 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 TTC13Q8NBP0 860 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 ASIC4Q96FT7 647 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 SMARCAD1Q9H4L7 1026 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 EPS15L1Q9UBC2 864 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 DIS3Q9Y2L1 958 aaKnown RBP14.52□□□□□ -0.08
GPC6-201ENST00000377047 EMSYQ7Z589 1322 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 EYA4O95677 639 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 CLTAP09496 248 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 GUCY1A2P33402 732 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 NAALADL2Q58DX5 795 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.08
GPC6-201ENST00000377047 PPWD1Q96BP3 646 aaKnown RBP14.52□□□□□ -0.08
GPC6-201ENST00000377047 SPATA17Q96L03 361 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 CAMSAP1Q5T5Y3 1602 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 FAM117BQ6P1L5 589 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 TTC39CQ8N584 583 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 SH2D3AQ9BRG2 576 aa14.52□□□□□ -0.08
GPC6-201ENST00000377047 ESRRBO95718 433 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 MXD4Q14582 209 aaPredicted RBP14.52□□□□□ -0.09
GPC6-201ENST00000377047 SLC13A4Q9UKG4 626 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 UNC13BO14795 1591 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 CETPP11597 493 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 ARL4CP56559 192 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 FAM151AQ8WW52 585 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 ABHD10Q9NUJ1 306 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 IP6K2Q9UHH9 426 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 SYNGAP1Q96PV0 1343 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 ABCA6Q8N139 1617 aa14.52□□□□□ -0.09
GPC6-201ENST00000377047 SRRM1Q8IYB3 904 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 SCYL3Q8IZE3 742 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 NMT1P30419 496 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 AP3M2P53677 418 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 RABL6Q3YEC7 729 aaPredicted RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 SZRD1Q7Z422 152 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 DHX35Q9H5Z1 703 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 PIK3R2O00459 728 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 TRAPPC3O43617 180 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 SGMS1Q86VZ5 419 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 SPATS2Q86XZ4 545 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 DYRK4Q9NR20 520 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 FAN1Q9Y2M0 1017 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 ORC6Q9Y5N6 252 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 DFFAO00273 331 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 NTSR2O95665 410 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 MRPS25P82663 173 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 PGBD4Q96DM1 585 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 CYP26B1Q9NR63 512 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 TSR3Q9UJK0 312 aaKnown RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 RARBP10826 455 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 CA4P22748 312 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 RFC1P35251 1148 aaPredicted RBP14.51□□□□□ -0.09
GPC6-201ENST00000377047 OCRLQ01968 901 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 SREBF2Q12772 1141 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 GPRC5AQ8NFJ5 357 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 TNIP3Q96KP6 325 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 IQSEC2Q5JU85 1478 aa14.51□□□□□ -0.09
GPC6-201ENST00000377047 MIF4GDA9UHW6 222 aaKnown RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 KIF28PB7ZC32 967 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 FTLP02792 175 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 ART3Q13508 389 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 MAML1Q92585 1016 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 DEFB129Q9H1M3 183 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 NOVA2Q9UNW9 492 aaKnown RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 SLC15A2Q16348 729 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 KIF19Q2TAC6 998 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 VCPKMTQ9H867 229 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 SRGAP2O75044 1071 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 ATP2C1P98194 919 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 IER5Q5VY09 327 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 HEATR6Q6AI08 1181 aaKnown RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 SNX19Q92543 992 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 PPP2R3CQ969Q6 453 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 DACT3Q96B18 629 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 MAGEB5Q9BZ81 275 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 NYAP2Q9P242 653 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 E5RI56 91 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 CTNND1O60716 968 aaKnown RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 HSPA4LO95757 839 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 CDR2Q01850 454 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 TJP2Q9UDY2 1190 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 WHAMMQ8TF30 809 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 GTF3C2Q8WUA4 911 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 RMDN2Q96LZ7 410 aa14.5□□□□□ -0.09
GPC6-201ENST00000377047 TTC7AQ9ULT0 858 aaPredicted RBP14.5□□□□□ -0.09
GPC6-201ENST00000377047 AGAP1Q9UPQ3 857 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms